FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi744.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi744.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4576
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC164435.92657342657343No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT98321.481643356643357No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA3317.233391608391608No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC1362.972027972027972No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGCTCGTAATCTC1022.229020979020979No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGCAGTGGATGTCTAGGC851.8575174825174825No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT661.4423076923076923No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCAGCAGTGGATGT581.2674825174825175No Hit
CGGAAGGATCATTACCACACTACAGCAGTGGATGTCTAGGCTCTGTCTCT561.2237762237762237No Hit
CGGAAGGATCATTACCACGTCGGCAGCAGTGGATGTCTAGGCTCTGTCTC511.1145104895104896No Hit
CGGAAGGATCATTACCACGAGCAGCAGTGGATGTCTAGGCTCTGTCTCTT360.7867132867132868No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC320.6993006993006993No Hit
CGGAAGGATCATTACCACTGTCTCTTATACACATCTGCAGCAGTGGATGT220.4807692307692308No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACCG170.3715034965034965No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTCGTTAT140.30594405594405594No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA140.30594405594405594No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACTGTCGTTAT120.26223776223776224No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC120.26223776223776224No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACTGTCGTTATTT120.26223776223776224No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACAGCAGTGGATGTCTAGGC110.2403846153846154No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAC110.2403846153846154No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC110.2403846153846154No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC100.21853146853146854No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA100.21853146853146854No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACAGTATCAAC100.21853146853146854No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGCTAT100.21853146853146854No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC90.1966783216783217No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC80.17482517482517482No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC80.17482517482517482No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTCTCGTTAT70.15297202797202797No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC70.15297202797202797No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT70.15297202797202797No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACTGTCGTTAT70.15297202797202797No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAACC70.15297202797202797No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAC70.15297202797202797No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC70.15297202797202797No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC70.15297202797202797No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCAGCCGTGGATGT60.13111888111888112No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTACACGTGAACTGTCGTTAT60.13111888111888112No Hit
CGGAAGGATCATTACCACGGGACAGCAGTGGATGTCTAGGCTCTGTCTCT60.13111888111888112No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTACACGTGAACCGTATCAAC60.13111888111888112No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAACCAA60.13111888111888112No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC60.13111888111888112No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC60.13111888111888112No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTAGTTAT60.13111888111888112No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC50.10926573426573427No Hit
CGGAAGGATCATTACCACACCTGAAAACTTTCCACGTGAACCGTATCAAC50.10926573426573427No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG50.10926573426573427No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACTGTCGTTAT50.10926573426573427No Hit
CGGAAGGATCATTACCACACCTACAAACTTTCCACGTGAACCGTATCAAC50.10926573426573427No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACTGTCGTTAT50.10926573426573427No Hit
CGGAAGGATCATTATCACACCTAAAAACTTTCCACGTGAACCGTATCAAC50.10926573426573427No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCCAC50.10926573426573427No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)