FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi742.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi742.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences878
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT27331.09339407744875No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT23626.879271070615037No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA13315.148063781321182No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC364.100227790432802No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT80.9111617312072893No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCACTGTCTCT60.683371298405467No Hit
CGGAAGGATCATTACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATACAC50.5694760820045558No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGACTAGGCTCTGTCTCTTA40.45558086560364464No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC40.45558086560364464No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG40.45558086560364464No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT30.3416856492027335No Hit
CGGAAGGATCATTACCACAAGACAGCAGTGGATGTCTAGGCTCTGTCTCT30.3416856492027335No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCACTTTGTAT30.3416856492027335No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGACGTCTAGGCTCTGTCTCT30.3416856492027335No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAC30.3416856492027335No Hit
CGGAAGGATTATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT20.22779043280182232No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTTTCTCTTA20.22779043280182232No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCGCTGTCTCT20.22779043280182232No Hit
CGGAAGGATCATTACCACAACAGCAGTGGATGTCTAGGCTCTGTCTCTTA20.22779043280182232No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTAACA20.22779043280182232No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCACTTTGTAT20.22779043280182232No Hit
CTTCCTTCTCCTTCCCACACCTAAAAAACTTTCCACGTGAACCGTATTCA20.22779043280182232No Hit
CGGAAGGATCATTACCACGACACAGCAGTGGATGTCTAGGCTCTGTCTCT20.22779043280182232No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTTT20.22779043280182232No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGAGGTCTAGGCTCTGTCTCT20.22779043280182232No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGAAGTCTAGGCTCTGTCTCT20.22779043280182232No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTTTAGGCTCTGTCTCT20.22779043280182232No Hit
CGGAAGGATCATTACCATACCAAAAACTATCCACGTGAACCACTTTGTAT20.22779043280182232No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCCCGTGAACCACTTTGTAT20.22779043280182232No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT20.22779043280182232No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATTG20.22779043280182232No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCCGTCTCTTA20.22779043280182232No Hit
AGGCCAGGGATGTATATCGGCGACACCGACGACGGGTCGGGCCTGCACCA10.11389521640091116No Hit
CGAAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATTG10.11389521640091116No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCTTATA10.11389521640091116No Hit
AGGCCTGGTATGTACATCGGATCCACGGGCGAGCGGGGCCTGCACCACCT10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGACAGAAGTGGATGTCTAGGCTCTGTCTCT10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGCTAGGCTCTGTCTCTT10.11389521640091116No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT10.11389521640091116No Hit
CGGAAGAATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.11389521640091116No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTCTCTCTTA10.11389521640091116No Hit
CGGAAGGATCATTACCACGACAGCATTGGATGTCTAGGCTCTGTCCTTAT10.11389521640091116No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCACTTTGTAT10.11389521640091116No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACGTTGTAT10.11389521640091116No Hit
CGGAAGGATATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.11389521640091116No Hit
CGGAAGGATAATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGGCAGCAGTGGATGTATAGGCTATGTCTCT10.11389521640091116No Hit
CGGAAGGATCATTCCCACGAGACAGCAGTAGATGTCTAGGCTCTGTCTCT10.11389521640091116No Hit
GGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCGTATACA10.11389521640091116No Hit
CGGAAGGTTCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.11389521640091116No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.11389521640091116No Hit
TGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT10.11389521640091116No Hit
GATGAGTCAGCGTCGAACGCCTGTTGCGCTGTCTGCACGATCCGCTGGAG10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCCCT10.11389521640091116No Hit
CGGAAGGATCATTACAACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCCTC10.11389521640091116No Hit
CGGAAGGATCATTACCACGACAGAAGTGGATGTCTAGGCTCTGTCTCTTA10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGACAGCAGGGATGTCTAGGCTCTGTCTCTT10.11389521640091116No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAACTTTGTAT10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGACAGCCGTGGATGTCTAGGCTCTGTCTCT10.11389521640091116No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGCTCTTATACA10.11389521640091116No Hit
AGGCCGGCAATGTACATCGGCGACACCGACGACGGGTCGGGCCTGCACCA10.11389521640091116No Hit
GATGAGTCAGAGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT10.11389521640091116No Hit
CGGAAGGATCATTACCACACCAAAAAATATCCACGTGAACCACTTTGTAT10.11389521640091116No Hit
AGCCCGGGGATGTATATTGGCGACACCTCCGACGGCACGGGCCTGCACCA10.11389521640091116No Hit
CGGAAGGATCATTACCCGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.11389521640091116No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAC10.11389521640091116No Hit
CGGCCTGCCATGTATATAGGCGACACCGACGACGGTTCCGGCCTCCACCA10.11389521640091116No Hit
CGGAAGGATCTTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGAATGTCTAGGCTCTGTCTCT10.11389521640091116No Hit
CGGAAGGATCATTACCACGGGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.11389521640091116No Hit
CGGGAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT10.11389521640091116No Hit
CGGAAGGCTCATTACCACGAGACAGCAGTGGAAGTCTAGGCTCTGTCTCT10.11389521640091116No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTCTGTAT10.11389521640091116No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCACTTTGTAT10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGCCTCT10.11389521640091116No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCTCTAT10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATCTAGGCCTGTTCTTATA10.11389521640091116No Hit
CGGAAGGATCATTACCCACACCAAAAACTATCCACGTGAACCACTTTGTA10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGTCAGCAGTGGATGTCTAGGCCCTGTCTCT10.11389521640091116No Hit
CGGAAGGATCATTACAACGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.11389521640091116No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTATGCTCTGTCTCTTATAC10.11389521640091116No Hit
CGGAAGGATCATTACCAGCAGTGGATGTCTAGGCTCTGTCTCCTATACAC10.11389521640091116No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACATGAACCACTTTGTAT10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTGGCTCTGTCTCTT10.11389521640091116No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTATCAAAC10.11389521640091116No Hit
CGTCCTGGTATGTATATCGGCGACACGTCCGACGGCACCGGCCTGCACCA10.11389521640091116No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCATGTGAACCACTTTGTAT10.11389521640091116No Hit
CGGAGGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.11389521640091116No Hit
AGACCGGGCATGTATATCGGCGACGCGTCCGACGACACCGGCCTGCACCA10.11389521640091116No Hit
CGGAAGGATCATTACTACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT10.11389521640091116No Hit
CGGAAGGATCATTACACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCCGTCTCT10.11389521640091116No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCTCTTTGTAT10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGAAAGCAGTGGATGTCTAGGCTCTGTCTCT10.11389521640091116No Hit
CGGAAGGATCATTACCGCACCAAAAACTATCCACGTGAACCACTTTGTAT10.11389521640091116No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGCACCACTTTGTAT10.11389521640091116No Hit
GATGCGTCAGCGTCGAACGCCTGTTGCGCTGTCTGCACGATCCGCTGGAG10.11389521640091116No Hit
CGGAAGGATCATTACCACAACAGCAGTGGATGTCTAGGCTCTGTTTCTTA10.11389521640091116No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTATAGGCTCTGTCTCTTA10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCATTGTCTCT10.11389521640091116No Hit
CGGAAGGATCATTACCCCACCAAAAACTATCCACGTGAACCACTTTGTAT10.11389521640091116No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCAGTTTGTAT10.11389521640091116No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGTGTGAACCACTTTGTAT10.11389521640091116No Hit
CGGAAGGATCATTACAACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC10.11389521640091116No Hit
AGACCCGGCATGTATATCGGGTCGACCGGCATCCGGGGCCTGCACCACCT10.11389521640091116No Hit
CGGAAGGATCATTACCACACCAAAAACTATCAACGTGAACCACTTTGTTT10.11389521640091116No Hit
CGGAAGGATCATTACCACGACAGCAGTGGAGGTCTAGGCTCTGTCTCTTA10.11389521640091116No Hit
ATCTCCGAGCCCACGAGACTGCTCGTAATCTCGTATGCCGTCTTCTGCTT10.11389521640091116TruSeq Adapter, Index 12 (96% over 29bp)
CGGAAGGATCATTACCACACCAAAACTATCCACGTGAACCACTTTGTATT10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGGCTAGGCTCTGTCTCT10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTAT10.11389521640091116No Hit
CGGAAGGATCATTAACACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTTTGTCTCT10.11389521640091116No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTCTCCTTAT10.11389521640091116No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTTTATACC10.11389521640091116No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACATTGTAT10.11389521640091116No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCACTTTGTAT10.11389521640091116No Hit
AGACCTGGGATGTACATCGGCGATACCGACGATGGATCGGGCCTGCACCA10.11389521640091116No Hit
CGGAAGGATCATTACCACACCAAAAACTAACCACGTGAACCACTTTGTAT10.11389521640091116No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAA10.11389521640091116No Hit
CGGAAGGATCATTACCACGACAGCATTGGATGTCTAGGCTCTGTCTCTTA10.11389521640091116No Hit
CGGAAGGATCATTACCACAACAAAAACTATCCACGTGAACCACTTTGTAT10.11389521640091116No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCAAGTGAACCACTTTGTAT10.11389521640091116No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGTCAGCAGTGGATGTCTAGGCTCTGTCTCT10.11389521640091116No Hit
CGGAAGGATCATTACCACATCAAAAACTATCCACGTGAACCACTTTGTAT10.11389521640091116No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCATTTTGTAT10.11389521640091116No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTATACA10.11389521640091116No Hit
AGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGACAGCAATGGATGTCTAGGCTCTGTCTCT10.11389521640091116No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTTCTCTTATACA10.11389521640091116No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGTGAACCACTTTGTAT10.11389521640091116No Hit
CGGAAGGATCATACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATACA10.11389521640091116No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGCCTCTTA10.11389521640091116No Hit
CGGAAGGATATTACCACGAGACAGAGTGGATGTCTAGGCTCTGTCTCTTA10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTTGTCTC10.11389521640091116No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGAGAACCACTTTGTAT10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGCCTCT10.11389521640091116No Hit
AGCCCGGGGATGTATATTGGCGACACCGACGACGGGTCGGGCCTGCACCA10.11389521640091116No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCCCTTATAC10.11389521640091116No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCACTTTGTAT10.11389521640091116No Hit
CGGAAGGATCATTACCAAGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.11389521640091116No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTATCTTA10.11389521640091116No Hit
TGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.11389521640091116No Hit
AGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.11389521640091116No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTTAACCACTTTGTAT10.11389521640091116No Hit
CGGAAGGATCATTACCCGACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT10.11389521640091116No Hit
AGGCCAGGGATGTACATCGGCGACACCGACGACGGCTCGGGCATGCACCA10.11389521640091116No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTTT10.11389521640091116No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCACTTTGTAT10.11389521640091116No Hit
AGTCCGGGGATGTACATCGGCAACACCGACGACGGCTCGGGCCTGCACCA10.11389521640091116No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)