FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi741.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi741.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10773
Sequences flagged as poor quality0
Sequence length301
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA740068.69024412884062No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC7326.794764689501531No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTTCCACGTGAACCGTATTCA1651.5316067947646894No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTCAA1111.0303536619326092No Hit
CGGAAGGATCATTACCACCTAAAAAACTTTCCACGTGAACCGTATTCAAC840.7797270955165692No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTACACGTGAACCGTATTCA770.7147498375568551No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTTA660.6126427179058758No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA580.5383829945233454No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGCGAACCGTATTCA530.4919706674092639No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAGCCGTATTCA500.464123271140815No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGGACCGTATTCA480.4455583402951824No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTTTCCACGTGAACCGTATTCA430.3991460131811009No Hit
CGGAAGGATCATTACCACACCTAAAGAACTTTCCACGTGAACCGTATTCA370.3434512206442031No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCGCGTGAACCGTATTCA370.3434512206442031No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTACTCA350.3248862897985705No Hit
CGGAAGGATCATTACCACACCTAAAAAACTCTCCACGTGAACCGTATTCA350.3248862897985705No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC350.3248862897985705No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC340.3156038243757542No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT300.278473962684489No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCCACGTGAACCGTATTCA280.2599090318388564No Hit
CGGAAGGATCATTACCACACCTAAAAAACCTTCCACGTGAACCGTATTCA280.2599090318388564No Hit
CGGAAGGATTATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA280.2599090318388564No Hit
CGGAAGGATCATTACCACACCTAAAAAGCTTTCCACGTGAACCGTATTCA270.2506265664160401No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCG260.2413441009932238No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCCA250.2320616355704075No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA240.2227791701475912No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC240.2227791701475912No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAAACGTATTCA230.2134967047247749No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGCATTCA220.2042142393019586No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGACCCGTATTCA220.2042142393019586No Hit
CGGAAGGATCATTACCACACCTAGAAAACTTTCCACGTGAACCGTATTCA210.1949317738791423No Hit
CGGAAGGATCATTACCACACCTAAAAGACTTTCCACGTGAACCGTATTCA190.1763668430335097No Hit
CGGAAGGATCATTACCACACCTGAAAAACTTTCCACGTGAACCGTATTCA170.1578019121878771No Hit
CGGAAGGATCATACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA170.1578019121878771No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCAACGTGAACCGTATTCA160.1485194467650608No Hit
CGGAAGGATCATTACCACACCTAAGAAACTTTCCACGTGAACCGTATTCA150.1392369813422445No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTGTTCA150.1392369813422445No Hit
CGGAAGGATCATTACCACACCCAAAAAACTTTCCACGTGAACCGTATTCA150.1392369813422445No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACTTGAACCGTATTCA140.1299545159194282No Hit
CGGAAGGATCATTACCCCACCTAAAAAACTTTCCACGTGAACCGTATTCA130.1206720504966119No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACATGAACCGTATTCA130.1206720504966119No Hit
CGGAAGGATCATTACAACACCTAAAAAACTTTCCACGTGAACCGTATTCA130.1206720504966119No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCC130.1206720504966119No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTTTTCA120.1113895850737956No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAATCGTATTCA120.1113895850737956No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTCTTCA120.1113895850737956No Hit
CGGAAGGATCTTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA110.1021071196509793No Hit
CGGAAGGATCATTATCACACCTAAAAAACTTTCCACGTGAACCGTATTCA110.1021071196509793No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCTTATTCA110.1021071196509793No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTGCCACGTGAACCGTATTCA110.1021071196509793No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTTAACCGTATTCA110.1021071196509793No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTAAACCGTATTCA110.1021071196509793No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTAA110.1021071196509793No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGTACCGTATTCA110.1021071196509793No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)