FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi735.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi735.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9577
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA315332.92262712749295No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAACCGTTGTA256626.793359089485225No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT104010.859350527305002No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCTATTAAAC1311.367860499112457No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA1201.2530019839198079No Hit
CGGAAGGATCATTACCACACCAAAAAACACTTTCCACGTGAACCGTTGTA780.8144512895478752No Hit
CGGAAGGATCATTACCACACCAAAAAACCTTTCCACGTGAACCGTTGTAA630.6578260415578991No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGACCCGTTGTA520.5429675263652501No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTCCCACGTGAACCGTTGTAA500.5220841599665866No Hit
CGGAAGGATCATTACCACACCAAAAAAAAACTTTCCACGTGAACCGTTGT430.4489923775712645No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTACACGTGAACCGTTGTAA410.428109011172601No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTGTAAT380.3967839615746058No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACTGTCGTTAT370.38634227837527413No Hit
CGGAAGGATCATTACCACCAAAAAAACTTTCCACGTGAACCGTTGTAATT310.32369217917928367No Hit
CGGAAGGATCATTACCACCAAAAAAAACTTTCCACGTGAACCGTTGTAAT310.32369217917928367No Hit
CGGAAGGATCATTACCACACCAAAAGAACTTTCCACGTGAACCGTTGTAA240.25060039678396157No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTCCCACGTGAACCGTTGTA240.25060039678396157No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTCGTAA240.25060039678396157No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTACCACGTGAACCGTTGTA240.25060039678396157No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAACCGTTGTG230.24015871358462984No Hit
CGGAAGGATCATTACCACACCAAAAAAACTCTCCACGTGAACCGTTGTAA230.24015871358462984No Hit
CGGAAGGATCATTACCACACCAAAAGAAACTTTCCACGTGAACCGTTGTA230.24015871358462984No Hit
CGGAAGGATCATTACCACGCCAAAAAAAACTTTCCACGTGAACCGTTGTA230.24015871358462984No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAGCCGTTGTA200.20883366398663467No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGCGAACCGTTGTAA200.20883366398663467No Hit
CGGAAGGATCATTACCACACCGAAAAAACTTTCCACGTGAACCGTTGTAA200.20883366398663467No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTTTCCACGTGAACCGTTGTAA180.1879502975879712No Hit
CGGAAGGATCATTACCACACCAAAGAAACTTTCCACGTGAACCGTTGTAA170.17750861438863946No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGGACCGTTGTAA170.17750861438863946No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGCACCGTTGTA160.1670669311893077No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAACCGTCGTA160.1670669311893077No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT160.1670669311893077No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGCTGTAA160.1670669311893077No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGACCCGTTGTAA160.1670669311893077No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGGACCGTTGTA160.1670669311893077No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAGCCGTTGTAA160.1670669311893077No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTGTAAT150.15662524798997599No Hit
CGGAAGGATTATTACCACACCAAAAAAAACTTTCCACGTGAACCGTTGTA150.15662524798997599No Hit
CGGAAGGATTATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA150.15662524798997599No Hit
CGGAAGGATCATTACCACACCAAAAAGACTTTCCACGTGAACCGTTGTAA150.15662524798997599No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACTGTTGTAA150.15662524798997599No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTCTCCACGTGAACCGTTGTA140.14618356479064426No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCGCGTGAACCGTTGTAA130.13574188159131254No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACTGTCGTTATTT130.13574188159131254No Hit
CGGAAGGATCATTACCACACCAAAGAAAACTTTCCACGTGAACCGTTGTA120.12530019839198078No Hit
CGGAAGGATCATTACCACACCAAAAAAAGCTTTCCACGTGAACCGTTGTA120.12530019839198078No Hit
CGGAAGGATCATTACCACACCAAGAAAACTTTCCACGTGAACCGTTGTAA120.12530019839198078No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAAACGTTGTAA120.12530019839198078No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCAACGTGAACCGTTGTAA110.11485851519264906No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTCGTTAT110.11485851519264906No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGATGTAA100.10441683199331733No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCAACGTGAACCGTTGTA100.10441683199331733No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTGA100.10441683199331733No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)