FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi733.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi733.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10664
Sequences flagged as poor quality0
Sequence length301
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA852479.93248312078019No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTTCCACGTGAACCGTATTCA1591.4909977494373594No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTACACGTGAACCGTATTCA700.6564141035258815No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTTA520.48762190547636913No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGGACCGTATTCA510.4782445611402851No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTCAA500.46886721680420107No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAGCCGTATTCA460.431357839459865No Hit
CGGAAGGATCATTACCACCTAAAAAACTTTCCACGTGAACCGTATTCAAC420.3938484621155289No Hit
CGGAAGGATCATTACCACACCTAAAGAACTTTCCACGTGAACCGTATTCA380.3563390847711928No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGACCCGTATTCA370.34696174043510875No Hit
CGGAAGGATCATTACCACACCTAAAAAACCTTCCACGTGAACCGTATTCA370.34696174043510875No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCGCGTGAACCGTATTCA350.32820705176294074No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCCACGTGAACCGTATTCA330.3094523630907727No Hit
CGGAAGGATCATTACCACACCTAAAAAACTCTCCACGTGAACCGTATTCA310.29069767441860467No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGCGAACCGTATTCA310.29069767441860467No Hit
CGGAAGGATCATTACCACACCTAAGAAACTTTCCACGTGAACCGTATTCA300.2813203300825206No Hit
CGGAAGGATTATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA290.2719429857464366No Hit
CGGAAGGATCATTACCACACCTAAAAAGCTTTCCACGTGAACCGTATTCA290.2719429857464366No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCCA280.2625656414103526No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCG280.2625656414103526No Hit
CGGAAGGATCATTACCACACCTAGAAAACTTTCCACGTGAACCGTATTCA280.2625656414103526No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTTTCCACGTGAACCGTATTCA270.25318829707426854No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTAAACCGTATTCA260.24381095273818457No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTACTCA250.23443360840210054No Hit
CGGAAGGATCATTACCACACCTAAAAGACTTTCCACGTGAACCGTATTCA250.23443360840210054No Hit
CGGAAGGATCATTACCACACCCAAAAAACTTTCCACGTGAACCGTATTCA250.23443360840210054No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCC210.19692423105776444No Hit
CGGAAGGATCATTACCACACCTAAAAATCTTTCCACGTGAACCGTATTCA200.1875468867216804No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACTGTATTCA190.1781695423855964No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGCATTCA170.15941485371342837No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAATCGTATTCA150.1406601650412603No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACATGAACCGTATTCA140.1312828207051763No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGAATTCA140.1312828207051763No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTGTTCA140.1312828207051763No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTAA140.1312828207051763No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACTTGAACCGTATTCA140.1312828207051763No Hit
CGGAAGGATCATACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA140.1312828207051763No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCATATTCA130.12190547636909228No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAAACGTATTCA130.12190547636909228No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTTCACGTGAACCGTATTCA130.12190547636909228No Hit
CGGAAGGATCATTACCACACCTGAAAAACTTTCCACGTGAACCGTATTCA130.12190547636909228No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTACCACGTGAACCGTATTCA120.11252813203300824No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTTAACCGTATTCA120.11252813203300824No Hit
CGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA110.10315078769692423No Hit
CGGAAGGATCATTACCCCACCTAAAAAACTTTCCACGTGAACCGTATTCA110.10315078769692423No Hit
CGGAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA110.10315078769692423No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCAACGTGAACCGTATTCA110.10315078769692423No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGCACCGTATTCA110.10315078769692423No Hit
CGGAAGGATCATTACCACATCTAAAAAACTTTCCACGTGAACCGTATTCA110.10315078769692423No Hit
CGGAAGGTCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA110.10315078769692423No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)