FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi728.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi728.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16142
Sequences flagged as poor quality0
Sequence length301
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA993461.54132077809441No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT12247.582703506380869No Hit
CGGAAGGATCATTACCACACCTAAAAATCTTCCACGTGAACCGTATCAAC5843.617891215462768No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTTCCACGTGAACCGTATTCA2171.3443191673894188No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTACACGTGAACCGTATTCA1150.7124272085243464No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTCAA1050.6504770164787511No Hit
CGGAAGGATCATTACCACGAACAGCAGTGGATGTCTAGGCTCTGTCTCTT980.6071118820468344No Hit
CGGAAGGATCATTACCACCTAAAAAACTTTCCACGTGAACCGTATTCAAC800.4956015363647627No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC710.4398463635237269No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGGACCGTATTCA680.4212613059100483No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTTA660.4088712675009293No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCCACGTGAACCGTATTCA610.3778961714781316No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC590.36550613306901253No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAA540.33453103704621484No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTACTCA520.3221409986370958No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTTTCCACGTGAACCGTATTCA510.3159459794325362No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAGCCGTATTCA510.3159459794325362No Hit
CGGAAGGATTATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA500.3097509602279767No Hit
CGGAAGGATCATTACCACACCTAAAAAACCTTCCACGTGAACCGTATTCA490.3035559410234172No Hit
CGGAAGGATCATTACCACACCTAAAAAACTCTCCACGTGAACCGTATTCA450.278775864205179No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCCA440.2725808450006195No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGACCCGTATTCA420.26019080659150046No Hit
CGGAAGGATCATTACCACACCTAAAGAACTTTCCACGTGAACCGTATTCA410.2539957873869409No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCG390.24160574897782186No Hit
CGGAAGGATCATTACCACACCTAGAAAACTTTCCACGTGAACCGTATTCA380.2354107297732623No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCGCGTGAACCGTATTCA380.2354107297732623No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCAACGTGAACCGTATTCA370.22921571056870277No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGCGAACCGTATTCA370.22921571056870277No Hit
CGGAAGGATCATTACCACACCTAAAAAGCTTTCCACGTGAACCGTATTCA350.21682567215958368No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAAACGTATTCA340.21063065295502414No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA340.21063065295502414No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTAAACCGTATTCA330.20443563375046464No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCC330.20443563375046464No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTAA330.20443563375046464No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTCTTCA320.1982406145459051No Hit
CGGAAGGATCATTACCACACCTAAAAGACTTTCCACGTGAACCGTATTCA320.1982406145459051No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTGTTCA300.18585057613678604No Hit
CGGAAGGATCATTACCACACCCAAAAAACTTTCCACGTGAACCGTATTCA300.18585057613678604No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTACCACGTGAACCGTATTCA300.18585057613678604No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCACTTTGT280.17346053772766695No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTTCACGTGAACCGTATTCA260.1610704993185479No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCCCTTTGTAT260.1610704993185479No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA260.1610704993185479No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACATGAACCGTATTCA260.1610704993185479No Hit
CGGAAGGATCATTACCACACCTAAGAAACTTTCCACGTGAACCGTATTCA250.15487548011398836No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGCATTCA250.15487548011398836No Hit
CGGAAGGATCATTACCACACCTGAAAAACTTTCCACGTGAACCGTATTCA210.13009540329575023No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTGCCACGTGAACCGTATTCA200.12390038409119067No Hit
CGGAAGGATCATTACCACACCTAAAAATCTTTCCACGTGAACCGTATTCA190.11770536488663115No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCATGTGAACCGTATTCA190.11770536488663115No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAAGCGTATTCA190.11770536488663115No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCATATTCA190.11770536488663115No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACTGTATTCA190.11770536488663115No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGCACCGTATTCA180.11151034568207162No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAATCGTATTCA170.10531532647751207No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)