FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi724.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi724.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2013
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAAATGTTCTGT88043.71584699453552No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC36818.281172379533036No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT1919.488325881768505No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT592.930948832588177No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAACTGTTCTGT261.291604570293095No Hit
CGGAAGGATCATTACCACACCAAAAAACCTTACCACGTGAAATGTTCTGT221.092896174863388No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGACATGTTCTGT150.7451564828614009No Hit
CGGAAGGATCATTACCACCAAAAAAACTTACCACGTGAAATGTTCTGTTT120.5961251862891207No Hit
CGGAAGGATCATTACCACACCAAAAAACTTACCACGTGAAATGTTCTGTT110.546448087431694No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC110.546448087431694No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCCCTTATAC90.44709388971684055No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT90.44709388971684055No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTGTCAAA90.44709388971684055No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG90.44709388971684055No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT80.39741679085941384No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAAGTGTTCTGT80.39741679085941384No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTAACACGTGAAATGTTCTGT70.34773969200198707No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAAACGTTCTGT60.29806259314456035No Hit
CGGAAGGATCATTACCACACCAAAGAAACTTACCACGTGAAATGTTCTGT60.29806259314456035No Hit
CGGAAGGATCATTACCACACCGAAAAAACTTACCACGTGAAATGTTCTGT50.24838549428713363No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAAATGTTCCGT50.24838549428713363No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGGAATGTTCTGT40.19870839542970692No Hit
CGGAAGGATCATTACCACACCAAAAAACCTTACCACGTGAACTGTTCTGT40.19870839542970692No Hit
CGGAAGGATCATTACCACACCAAAAGAACTTACCACGTGAAATGTTCTGT40.19870839542970692No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTCCCACGTGAAATGTTCTGT40.19870839542970692No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG40.19870839542970692No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTATCACGTGAAATGTTCTGT40.19870839542970692No Hit
CGGAAGGATCATACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA30.14903129657228018No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAAATGTCCTGT30.14903129657228018No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA30.14903129657228018No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTATCTTATAC30.14903129657228018No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACAACGTGAAATGTTCTGT30.14903129657228018No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCCGTCTCTT30.14903129657228018No Hit
CGGAAGGATCATTACCACACCAAAAAATCTTACCACGTGAAATGTTCTGT30.14903129657228018No Hit
CGGAAGGATCATTACCCCACCAAAAAAACTTACCACGTGAAATGTTCTGT30.14903129657228018No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT30.14903129657228018No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTAAAATGTTCTGT30.14903129657228018No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCCCTGTCTCTT30.14903129657228018No Hit
CGGAAGGTCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTTT30.14903129657228018No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC30.14903129657228018No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAA30.14903129657228018No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)