FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi721.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi721.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14859
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC620941.786122888485096No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT277018.64190053166431No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT182612.28884850932095No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTAAGC4763.2034457231307627No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT1470.9892994144962648No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACTGTTTGTAT1420.9556497745474124No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC1360.9152702066087892No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA1180.7941315027929201No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC850.5720438791304934No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC650.4374453193350831No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACTGTCGTTAT610.4105256073760011No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA500.3364963994885255No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACCC490.329766471498755No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC420.2826569755703614No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC400.2691971195908204No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCACTTTGTA390.26246719160104987No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC330.2220876236624268No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC330.2220876236624268No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC320.21535769567265628No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATTG310.20862776768288577No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCCCTTTGTAT300.20189783969311528No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC290.19516791170334477No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAC290.19516791170334477No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC280.18843798371357426No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTATCAAC280.18843798371357426No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAACCGTTGTA270.18170805572380377No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC270.18170805572380377No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTCGTTAT270.18170805572380377No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACTGTCGTTAT260.17497812773403326No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC250.16824819974426275No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACTGTCGTTAT250.16824819974426275No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC240.16151827175449224No Hit
CGGAAGGATCATTACCACCCCAAAAACTATCCACGAGAACCACTTTGTAT240.16151827175449224No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAC230.15478834376472173No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC210.1413284877851807No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAACC210.1413284877851807No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTATCAACC200.1345985597954102No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCACTTTGTAT200.1345985597954102No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCACTTTGTAT200.1345985597954102No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC190.12786863180563968No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTAAACCGTATCAAC190.12786863180563968No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCACTTTGT170.11440877582609865No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT170.11440877582609865No Hit
CGGAAGGATCATTACCACGAACCAGCAGTGGATGTCTAGGCTCTGTCTCT170.11440877582609865No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC160.10767884783632814No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC160.10767884783632814No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)