FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi716.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi716.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1471
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACTGTCTTAC27218.49082256968049No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA19913.528212100611828No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC19112.984364377974167No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAAATGTTCTGT1359.177430319510536No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTGTAAC573.8749150237933376No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT382.583276682528892No Hit
CGGAAGGATCATTACCACACCAAAAAATATTCATGAGAAACTTTTCGTTA382.583276682528892No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA372.515295717199184No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT271.8354860639021073No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAGCAA261.7675050985723997No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT241.6315431679129844No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTTCACGTGAACCTGTACTG241.6315431679129844No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA191.291638341264446No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT171.1556764106050306No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAAAC161.087695445275323No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG120.8157715839564922No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTTCCACGTGAACTGTCTTAC100.6798096532970768No Hit
CGGAAGGATCATTACCACTGCGCGCCGACAGCAGTGGATGTCTAGGCTCT80.5438477226376615No Hit
CGGAAGGATCATTACCACGCCAAAGACTATCCACGTGAACCGTTAACCAA70.4758667573079538No Hit
CGGAAGGATCATTACCACAGAGACAGCAGTGGATGTCTAGGCTCTGTCTC70.4758667573079538No Hit
CGGAAGGATCATTACCACCTAAAAAACTTTCCACGTGAACTGTCTTACTT60.4078857919782461No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAACTGTTCTGT50.3399048266485384No Hit
CGGAAGGATCATTACCACGCCGAAAACTATCCACGTGAACCGTTAAGCAA50.3399048266485384No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTAAACTGTCTTAC50.3399048266485384No Hit
CGGAAGGATCATTACCACACCAAAAGACTTTCCACGTGAACCGTTGTAAC40.27192386131883073No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCATCAGAAAT40.27192386131883073No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCTTACT30.20394289598912305No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTAACACGTGAAATGTTCTGT30.20394289598912305No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGACATGTTCTGT30.20394289598912305No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCAACGTGAACCGTTGTAAC30.20394289598912305No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCCCTTATAC30.20394289598912305No Hit
CGGAAGGATCATTACCACACCAAAAAACCTTACCACGTGAAATGTTCTGT30.20394289598912305No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGTCAGAAAT30.20394289598912305No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC30.20394289598912305No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTTGTAA30.20394289598912305No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAA30.20394289598912305No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGCTAACCAA30.20394289598912305No Hit
CGGGAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC20.13596193065941536No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCCACGTGAACTGTCTTAC20.13596193065941536No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA20.13596193065941536No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTATCTTATAC20.13596193065941536No Hit
CGGAAGGATCATTACCACACCAAAAAATATTCATGAGAAACCTTTCGTTA20.13596193065941536No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGGACCGTTAACCAA20.13596193065941536No Hit
CGGAAGGATCATTACCACACCAAAAAACCTTCCACGTGAACCGTTGTAAC20.13596193065941536No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCCTTGTAAC20.13596193065941536No Hit
CGGAAGGATCATTACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATACAC20.13596193065941536No Hit
CGGAAGGTCATTACCACACCTAAAAAACTTTCCACGTGAACTGTCTTACT20.13596193065941536No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAGCCGTTAACCAA20.13596193065941536No Hit
CGGAAGATCATTACCACACCAAAAAAACTTACAACGTGAAATGTTCTGTT20.13596193065941536No Hit
CGGAAGGATCATTACCACACCAAAAAACTTACCACGTGAAATGTTCTGTT20.13596193065941536No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAAATGCTCTGT20.13596193065941536No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGACCTGTCTTAC20.13596193065941536No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTCAACTGTCTTAC20.13596193065941536No Hit
CGGAAGGATCATTACCACCAAAAGACTATCCACGTGAACCGTTACATACC20.13596193065941536No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTAAAATGTTCTGT20.13596193065941536No Hit
CGGAAGGATCATTACCACACCTATAAACTTTCCACGTGAACCGTATCAAC20.13596193065941536No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACTGTCTACT20.13596193065941536No Hit
CGGAAGGATCATTACCACGCAAAAAACTATCCACGTGAACCGTTAACCAA20.13596193065941536No Hit
CGGAAGGATCATTACCACCCTAAAAAACTTTCCACGTGAACTGTCTTACT20.13596193065941536No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)