FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi710.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi710.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4402
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC167838.11903680145389No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAACCAA154535.09768287142208No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA1804.08905043162199No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGCAGTGGATGTCTAGGC551.2494320763289415No Hit
CGGAAGGATCATTACCACCGTCAGCAGTGGATGTCTAGGCTCTGTCTCTT461.0449795547478418No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTATCAACA380.8632439800090868No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA260.5906406179009541No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTATCAAC230.5224897773739209No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC210.47705588368923213No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGCTAACCAA210.47705588368923213No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAGCCGTTAACCAA160.3634711494775102No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC140.31803725579282144No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA140.31803725579282144No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC110.24988641526578828No Hit
CGGAAGGATCATTACCACACCTAAAGCTATCCACGTGAACCGTTAACCAA100.2271694684234439No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC100.2271694684234439No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAC100.2271694684234439No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC90.2044525215810995No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCCTTAACCAA90.2044525215810995No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC90.2044525215810995No Hit
CGGAAGGATCATTACCACCGGCAGCAGTGGATGTCTAGGCTCTGTCTCTT90.2044525215810995No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC80.1817355747387551No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC80.1817355747387551No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCG70.15901862789641072No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTATTCAAC70.15901862789641072No Hit
CGGAAGGATCATTACCACACCTAGAACTATCCACGTGAACCGTTAACCAA70.15901862789641072No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC70.15901862789641072No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC70.15901862789641072No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCGCGTGAACCGTTAACCAA70.15901862789641072No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAACCGA60.13630168105406634No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAACA60.13630168105406634No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTATCAACC60.13630168105406634No Hit
CGGAAGGATCATTACCACACCTAAAAACTGTCCACGTGAACCGTATCAAC60.13630168105406634No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA60.13630168105406634No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGGTAACCAA60.13630168105406634No Hit
CGGAAGGATCATTACCACGCCTAAAACTATCCACGTGAACCGTTAACCAA60.13630168105406634No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAC60.13630168105406634No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA60.13630168105406634No Hit
CGGAAGGATCATTACCACACCTGAAAACTTTCCACGTGAACCGTATCAAC60.13630168105406634No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACAGTATCAAC60.13630168105406634No Hit
CGGAAGGATCATTACCACACCTAAAACTATCAACGTGAACCGTTAACCAA60.13630168105406634No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTTAACCGTTAACCAA50.11358473421172195No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCTTATCAAC50.11358473421172195No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC50.11358473421172195No Hit
CGGAAGGATCATTACCACACCTAAAACTACCCACGTGAACCGTTAACCAA50.11358473421172195No Hit
CGGAAGGATCATTACCACCTAAAACTATCCACGTGAACCGTTAACCAAAC50.11358473421172195No Hit
CGGAAGGATCATTACCCCACCTAAAAACTTTCCACGTGAACCGTATCAAC50.11358473421172195No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTCAA50.11358473421172195No Hit
CGGAAGGATCATTACCACACCTAAAACCATCCACGTGAACCGTTAACCAA50.11358473421172195No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTCAACCAA50.11358473421172195No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC50.11358473421172195No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAGCCAA50.11358473421172195No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCCCGTGAACCGTTAACCAA50.11358473421172195No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)