FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi709.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi709.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10927
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA298227.29019859064702No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC229320.98471675665782No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG193317.69012537750526No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACTGTCATTA7977.293859247734968No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCTCTGTCTCTTA1951.7845703303743021No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGTAACGAGATCTC1731.5832341905372014No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA1331.2171684817424726No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCCGAGACAGCAGTGGATGTCT1080.9883774137457674No Hit
CGGAAGGATCATTACCACTCGGCAGCAGTGGATGTCTAGGCTCTGTCTCT740.677221561270248No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAA440.4026722796742015No Hit
CGGAAGGATCATTACCACACCAAAAAACCTTACCACGTGAATCTGTACTG390.3569140660748604No Hit
CGGAAGGATCATTACCACACCAAAAAACTTACCACGTGAATCTGTACTGT350.3203074951953876No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAA340.31115585247551936No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC320.2928525670357829No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACACCAGCAGTGGAT300.2745492815960465No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCAAGTGAACCGTATCAAC250.22879106799670543No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC230.21048778255696896No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAA230.21048778255696896No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCATTAT220.20133613983710075No Hit
CGGAAGGATCATTACCACCAAAAAAACTTACCACGTGAATCTGTACTGTT220.20133613983710075No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGACTCTGTACTG220.20133613983710075No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAAACC210.19218449711723257No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAA210.19218449711723257No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAACCTGTACTG200.18303285439736433No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAA190.17388121167749612No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAA180.1647295689576279No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC180.1647295689576279No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGGATCTGTACTG170.15557792623775968No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA170.15557792623775968No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTACCACGTGAATCTGTACTG160.14642628351789144No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC160.14642628351789144No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACCG160.14642628351789144No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAA160.14642628351789144No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC160.14642628351789144No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA150.13727464079802326No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAA140.12812299807815503No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAA140.12812299807815503No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC140.12812299807815503No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAG140.12812299807815503No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCCGTACTG130.11897135535828682No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAA130.11897135535828682No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC130.11897135535828682No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC130.11897135535828682No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAA120.10981971263841858No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC120.10981971263841858No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAA120.10981971263841858No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAA110.10066806991855037No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAGTCTGTACTG110.10066806991855037No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGA110.10066806991855037No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)