FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi703.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi703.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5892
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT105217.854718262050238No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA103217.515274949083505No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT61610.454854039375425No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA4968.418194161575016No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTACAAT3225.465037338764427No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA2424.107264086897488No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC2253.818737270875764No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC1021.7311608961303464No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTACAAT961.6293279022403258No Hit
CGGAAGGATCATTACCACACCAGCAGTGGATGTCTAGGCTCTGTCTCTTA570.9674134419551934No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCACTTTGT370.6279701289884589No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAAAA320.5431093007467752No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTAAAC280.47522063815342835No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCAGTGAACCGTTAAACAA260.44127630685675495No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAACCGTTGAA240.40733197556008144No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGCGAATTGTTACAATA220.37338764426340804No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC200.3394433129667346No Hit
CGGAAGGATCATTACCACACCAAAAAACCTATCCACGTGAACCGTCAAAA190.3224711473183978No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCACTTTGTA190.3224711473183978No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAGAA180.30549898167006106No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGTCAGAAAT170.28852681602172436No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCTATACCG160.2715546503733876No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTAAGC160.2715546503733876No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCACTTTGTAT160.2715546503733876No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTACAA130.22063815342837748No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCACTTTGTAT120.20366598778004072No Hit
CGGAAGGATCATTACCACACCAAAAACTTTCCACGTGAACCGTTACAATT120.20366598778004072No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCCCTTTGTAT120.20366598778004072No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCACTTTGTAT120.20366598778004072No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGACCCGTCAAAA110.18669382213170402No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGAAA110.18669382213170402No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACAAT100.1697216564833673No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG90.15274949083503053No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAGCCGTCAAAA90.15274949083503053No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGGACCGTCAAAA90.15274949083503053No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATAG80.1357773251866938No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTACAT80.1357773251866938No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATACACGTGAACCGTCAAAA80.1357773251866938No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTCTGTAT80.1357773251866938No Hit
CGGAAGGATCATTACCACACCTAAAAACCTATCCACGTGAACCGTTAAGC80.1357773251866938No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT80.1357773251866938No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA80.1357773251866938No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTATCCACGTGAACCGTCAAAA70.11880515953835709No Hit
CGGAAGGATCATTACCACACCAAAAACAATCAACGTGAACCGTCAGAAAT70.11880515953835709No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT70.11880515953835709No Hit
CGGAAGGATCATTACCACACCAAAAAAACTACCCACGTGAACCGTCAAAA70.11880515953835709No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCAACGTGAACCGTTAAACA60.10183299389002036No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTCAGAAAT60.10183299389002036No Hit
CGGAAGGATCATTACCACACCAAAAACAATCTACGTGAACCGTCAGAAAT60.10183299389002036No Hit
CGGAAGGATCATTACCACACCGAAAAACTATCCACGTGAACCGTTAAACA60.10183299389002036No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAAACGTCAGAAAT60.10183299389002036No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACTTGAACCGTCAAAA60.10183299389002036No Hit
CGGAAGGATCATTACCACACCAAAAAAACTCTCCACGTGAACCGTCAAAA60.10183299389002036No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGGACCGTTAAACA60.10183299389002036No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)