FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi701.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi701.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11945
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC654754.809543742151526No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTCCACGTGAACTGTATCAA219318.35914608622855No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA2201.8417748011720385No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT1681.4064462118041021No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTACAAT1551.297614064462118No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGCAGTGGATGTCTAGGC850.7115948095437421No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC840.7032231059020511No Hit
CGGAAGGATCATTACCACACCTAAAAACACTTCCACGTGAACTGTATCAA820.6864796986186689No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACCC640.5357890330682293No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCTATACCG620.5190456257848473No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC570.4771871075763918No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC430.3599832565927166No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC420.35161155295102553No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC400.3348681456676434No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC350.2930096274591879No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC340.28463792381749686No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTCCACGTGAACCGTATCAA340.28463792381749686No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC320.26789451653411467No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC320.26789451653411467No Hit
CGGAAGGATCATTACCACACCCAAAAAAACTTCCACGTGAACTGTATCAA310.2595228128924236No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAC290.24277940560904146No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTCCCACGTGAACTGTATCAA250.2092925910422771No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC250.2092925910422771No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC230.19254918375889493No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC230.19254918375889493No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAACC230.19254918375889493No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC220.18417748011720383No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC220.18417748011720383No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAA220.18417748011720383No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA190.1590623691921306No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC190.1590623691921306No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC190.1590623691921306No Hit
CGGAAGGATCATTACCACCTAAAAAAACTTCCACGTGAACTGTATCAAAA190.1590623691921306No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA180.15069066555043953No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTAAACCGTATCAAC180.15069066555043953No Hit
CGGAAGGATCATTACCACACCTAAGAAAACTTCCACGTGAACTGTATCAA180.15069066555043953No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC170.14231896190874843No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTACACGTGAACTGTATCAA170.14231896190874843No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTATCAAC170.14231896190874843No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAC150.12557555462536626No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACATGAACCGTATCAAC140.11720385098367518No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAC130.1088321473419841No Hit
CGGAAGGATCATTACCACATCTAAAAACTTTCCACGTGAACCGTATCAAC130.1088321473419841No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTCCACGTGAACTGTACCAA130.1088321473419841No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATCAAC120.100460443700293No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCTGGTA120.100460443700293No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCCCGTGAACCGTATCAAC120.100460443700293No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)