FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi700.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi700.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2996
Sequences flagged as poor quality0
Sequence length301
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA161854.00534045393859No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA51017.022696929238982No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT923.0707610146862483No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTTCCACGTGAACCGTATTCA561.8691588785046727No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATCAAC561.8691588785046727No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACTGTATCAA170.5674232309746329No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGGACCGTATTCA140.46728971962616817No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTACACGTGAACCGTATTCA140.46728971962616817No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTAAACCGTATTCA130.43391188251001334No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACTGTATCAAA110.36715620827770357No Hit
CGGAAGGATTATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA100.33377837116154874No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTCAA100.33377837116154874No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTTTCCACGTGAACCGTATTCA90.30040053404539385No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAGCCGTATTCA90.30040053404539385No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACCGTATCAAA90.30040053404539385No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCGCGTGAACCGTATTCA90.30040053404539385No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTTA80.26702269692923897No Hit
CGGAAGGATCATTACCACACCTAAAAAACTCTCCACGTGAACCGTATTCA80.26702269692923897No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTACTCA70.23364485981308408No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAAACGTATTCA70.23364485981308408No Hit
CGGAAGGATCATTACCACCTAAAAAACTTTCCACGTGAACCGTATTCAAC70.23364485981308408No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAAGCGTATTCA70.23364485981308408No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGACCCGTATTCA70.23364485981308408No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTCTATCAAA60.20026702269692925No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGAATTCA60.20026702269692925No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAATCGTATTCA60.20026702269692925No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTTAACCGTATTCA60.20026702269692925No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCG50.16688918558077437No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTGCCACGTGAACCGTATTCA50.16688918558077437No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCCACGTGAACCGTATTCA50.16688918558077437No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTTCACGTGAACCGTATCAA50.16688918558077437No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT50.16688918558077437No Hit
CGGAAGGATCATTACCACACCTAAAGAACTTTCCACGTGAACCGTATTCA50.16688918558077437No Hit
CGGAAGGATCATTACCACACCTAAAAGACTTTCCACGTGAACCGTATTCA50.16688918558077437No Hit
CGGAAGGATCATTACCACACCTAGAAAACTTTCCACGTGAACCGTATTCA50.16688918558077437No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACAGTATTCA40.13351134846461948No Hit
GGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA40.13351134846461948No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTACCACGTGAACCGTATTCA40.13351134846461948No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCC40.13351134846461948No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTGTTCA40.13351134846461948No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTAA40.13351134846461948No Hit
CGGAAGGATCATTACCACACCTAAAAGACTTCCACGTGAACTGTATCAAA40.13351134846461948No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCTCGTGAACTGTATCAAA40.13351134846461948No Hit
CGGAAGGATCATTACCACACCTAAAAAGCTTTCCACGTGAACCGTATTCA40.13351134846461948No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCAACGTGAACCGTATTCA40.13351134846461948No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGCGAACCGTATTCA30.10013351134846463No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCCA30.10013351134846463No Hit
CGGAAGGATCATTACCACACATAAAAAACTTTCCACGTGAACCGTATTCA30.10013351134846463No Hit
CGGAAGGATCTTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA30.10013351134846463No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAC30.10013351134846463No Hit
CGGAAGGATCATTACCACACCTAAAAAACCTTCCACGTGAACCGTATTCA30.10013351134846463No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA30.10013351134846463No Hit
CGGAAGGATCATTACCACACCTAAAACACTTTCCACGTGAACCGTATTCA30.10013351134846463No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAGCTGTATCAAA30.10013351134846463No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTCCACGTGAACTGTATCAAA30.10013351134846463No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTCTTCA30.10013351134846463No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACTTGAACCGTATTCA30.10013351134846463No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCAACGTGAACTGTATCAAA30.10013351134846463No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC30.10013351134846463No Hit
CGGAAGGATCATTACCAAACCTAAAAAACTTTCCACGTGAACCGTATTCA30.10013351134846463No Hit
CGGAAGGATCATTACCACACCCAAAAAACTTTCCACGTGAACCGTATTCA30.10013351134846463No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCACGTGAACTGTATCAAAA30.10013351134846463No Hit
CGGAAGGATCATACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA30.10013351134846463No Hit
CGGAAGGATCATTACAACACCTAAAAAACTTTCCACGTGAACCGTATTCA30.10013351134846463No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)