FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi696.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi696.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7268
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT505769.57897633461751No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC3054.196477710511832No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCCCTTTGTAT831.1419922949917445No Hit
CGGAAGGATCATTACCACACCAAAAACTATCAACGTGAACCACTTTGTAT680.9356081452944414No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT380.5228398458998349No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC350.4815630159603742No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATAG340.4678040726472207No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT340.4678040726472207No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTCTGTAT310.42652724270776005No Hit
CGGAAGGATTATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT260.3577325261419923No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCACTTTGTAT260.3577325261419923No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCACTTTGTAT220.3026967528893781No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCACTTTGTAT200.27517886626307103No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT200.27517886626307103No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCACTTTGTAT190.26141992294991745No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT190.26141992294991745No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTTAACCACTTTGTAT190.26141992294991745No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCACTTTGTAT190.26141992294991745No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAAACACTTTGTAT190.26141992294991745No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTAAACCACTTTGTAT180.24766097963676387No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTCGTAT180.24766097963676387No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACCTTGTAT170.23390203632361034No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTGT170.23390203632361034No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCAATTTGTAT170.23390203632361034No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCACTTTGTAT170.23390203632361034No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCAAGTGAACCACTTTGTAT160.2201430930104568No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCACTTTGTAT150.20638414969730323No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAACTTTGTAT150.20638414969730323No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGTGAACCACTTTGTAT150.20638414969730323No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTCT140.1926252063841497No Hit
CGGAAGGATCATTACCACAACAAAAACTATCCACGTGAACCACTTTGTAT120.1651073197578426No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTATGTAT120.1651073197578426No Hit
CGGAAGGATCATTACCACACCAAACACTATCCACGTGAACCACTTTGTAT120.1651073197578426No Hit
CGGAAGGATCATTACAACACCAAAAACTATCCACGTGAACCACTTTGTAT120.1651073197578426No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGAAT110.15134837644468904No Hit
CGGAAGGATCATTACCACACCAGAAACTATCCACGTGAACCACTTTGTAT110.15134837644468904No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCACTTTGTAT110.15134837644468904No Hit
CGGAAGGATCATTACCACACCAAAAACTATTCACGTGAACCACTTTGTAT110.15134837644468904No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCACTTTGTAT110.15134837644468904No Hit
CGGAAGGATCATACCACACCAAAAACTATCCACGTGAACCACTTTGTATA100.13758943313153552No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCACTTTGTAT100.13758943313153552No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCTCTTTGTAT100.13758943313153552No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGCAT100.13758943313153552No Hit
CGGAAGGATCATTACCAAACCAAAAACTATCCACGTGAACCACTTTGTAT100.13758943313153552No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACATTGTAT100.13758943313153552No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT100.13758943313153552No Hit
CGGAAGGATCATTACCACACCAAAACCTATCCACGTGAACCACTTTGTAT100.13758943313153552No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTATCAACC90.12383048981838193No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAC90.12383048981838193No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCCCGTGAACCACTTTGTAT90.12383048981838193No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCACTTTGTAT90.12383048981838193No Hit
CGGAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTATA90.12383048981838193No Hit
CGGAAGGATCATTACCACACCAAAAAATATCCACGTGAACCACTTTGTAT90.12383048981838193No Hit
CGGAAGGATCATTACCACACCAACAACTATCCACGTGAACCACTTTGTAT90.12383048981838193No Hit
CGGAAGGATCATTACCACACCAAAAACTATCTACGTGAACCACTTTGTAT90.12383048981838193No Hit
CGGAAGGATCATTATCACACCAAAAACTATCCACGTGAACCACTTTGTAT90.12383048981838193No Hit
CGGAAGGATCATTACCCCACCAAAAACTATCCACGTGAACCACTTTGTAT90.12383048981838193No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGCACCACTTTGTAT80.1100715465052284No Hit
AGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT80.1100715465052284No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCACTTTGTAT80.1100715465052284No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACATGAACCACTTTGTAT80.1100715465052284No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACTACTTTGTAT80.1100715465052284No Hit
CGGAAGGATCATTCCCACACCAAAAACTATCCACGTGAACCACTTTGTAT80.1100715465052284No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)