FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi692.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi692.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2041
Sequences flagged as poor quality0
Sequence length301
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGTAAA115456.54091131798138No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC28013.718765311122No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA582.8417442430181286No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC381.8618324350808426No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTGTAAA321.567858892699657No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT291.4208721215090643No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTATCAAC180.8819206271435571No Hit
CGGAAGGATCATTACCACTCAGCAGTGGATGTCTAGGCTCTGTCTCTTAT160.7839294463498285No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCAACGTGAACCGTTGTAAA160.7839294463498285No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCTCTGTCTCTTA150.7349338559529642No Hit
CGGAAGGATCATTACCACCATAAAACTTTCCACGTGAACCGTTGTAAATA140.6859382655560999No Hit
CGGAAGGATCATTACCACACCATAAGACTTTCCACGTGAACCGTTGTAAA100.4899559039686428No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC100.4899559039686428No Hit
CGGAAGGATCATTACCACACCATAAAACTCTCCACGTGAACCGTTGTAAA100.4899559039686428No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAGCCGTTGTAAA70.34296913277804997No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG70.34296913277804997No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA60.29397354238118567No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTCGTAAA60.29397354238118567No Hit
CGGAAGGATTATTACCACACCATAAAACTTTCCACGTGAACCGTTGTAAA60.29397354238118567No Hit
CGGAAGGATCATTACCACACCATAAAGCTTTCCACGTGAACCGTTGTAAA60.29397354238118567No Hit
CGGAAGGATCATTACCACACCATAGAACTTTCCACGTGAACCGTTGTAAA60.29397354238118567No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTAAACA50.2449779519843214No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTGTAAC50.2449779519843214No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTTAAACA50.2449779519843214No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT50.2449779519843214No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGGACCGTTGTAAA40.19598236158745713No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGCTGTAAA40.19598236158745713No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCCTTGTAAA40.19598236158745713No Hit
CGGAAGGATCATTACCACACCGTAAAACTTTCCACGTGAACCGTTGTAAA40.19598236158745713No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTGTAAA40.19598236158745713No Hit
CGGAAGGATCATTACCACACCATAAAACTATCCACGTGAACCGTTGTAAA40.19598236158745713No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTGTAAA30.14698677119059284No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCACTGTAAA30.14698677119059284No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGTGAA30.14698677119059284No Hit
CGGAAGGATCATTACCACACCATAAAACCTTCCACGTGAACCGTTGTAAA30.14698677119059284No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCCCGTGAACCGTTGTAAA30.14698677119059284No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTAAACA30.14698677119059284No Hit
CGGAAGGATCATTACCACACCAGAAAACTTTCCACGTGAACCGTTGTAAA30.14698677119059284No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCATGTGAACCGTTGTAAA30.14698677119059284No Hit
CGGAAGGATCATTACCACATCTGACGCTGCCACGACAGCAGTGGATGTCT30.14698677119059284No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA30.14698677119059284No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA30.14698677119059284No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCGCGTGAACCGTTGTAAA30.14698677119059284No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTTTAAA30.14698677119059284No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)