FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi685.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi685.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10639
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA764671.86765673465551No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA2061.9362722060344018No Hit
CGGAAGGATCATTACCACACCCGGGATCCACGATCTTGCTCCTAGGTTAA1961.842278409624965No Hit
CGGAAGGATCATTACCACTCCAGCAGTGGATGTCTAGGCTCTGTCTCTTA1161.090328038349469No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCAACGTGAACCGTTAAACA820.7707491305573833No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA590.5545633988156782No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAGCCGTTAAACA570.5357646395337908No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATTAAA540.5075665006109596No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA540.5075665006109596No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGAACCGTTAAACAAG530.49816712097001603No Hit
CGGAAGGATCATTACCACGCCAAAAAACTATCCACGTGAACCGTTAAACA520.4887677413290723No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGGACCGTTAAACA480.4511702227652975No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGCGAACCGTTAAACA470.4417708431243538No Hit
CGGAAGGATCATTACCACACCAAAAAGCTATCCACGTGAACCGTTAAACA440.4135727042015227No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCGCGTGAACCGTTAAACA440.4135727042015227No Hit
CGGAAGGATCATTACCACATCCAGCAGTGGATGTCTAGGCTCTGTCTCTT410.3853745652786916No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGAACCGTTAAACAAA370.3477770467149168No Hit
CGGAAGGATCATTACCACACCAAAAGACTATCCACGTGAACCGTTAAACA360.33837766707397315No Hit
CGGAAGGATCATTACCACACCAAGAAACTATCCACGTGAACCGTTAAACA350.3289782874330294No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACG340.31957890779208575No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTTAAACA340.31957890779208575No Hit
CGGAAGGATCATTACCACACCAAAGAACTATCCACGTGAACCGTTAAACA330.310179528151142No Hit
CGGAAGGATCATTACCACACCAAAAAACTACCCACGTGAACCGTTAAACA290.2725820095873672No Hit
CGGAAGGATCATTACCACACCGAAAAACTATCCACGTGAACCGTTAAACA280.26318262994642355No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA270.2537832503054798No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGCTAAACA260.24438387066453615No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAATA260.24438387066453615No Hit
CGGAAGGATTATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA250.23498449102359245No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAGACA250.23498449102359245No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAG250.23498449102359245No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTAAACCGTTAAACA250.23498449102359245No Hit
CGGAAGGATCATTACCACACCAAAAAACCATCCACGTGAACCGTTAAACA240.22558511138264875No Hit
CGGAAGGATCATTACCACACCAAAAAACTGTCCACGTGAACCGTTAAACA230.21618573174170508No Hit
CGGAAGGATCATTACCACACCAGAAAACTATCCACGTGAACCGTTAAACA230.21618573174170508No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTGAACA230.21618573174170508No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAACA210.19738697245981768No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCATTAAACA210.19738697245981768No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTAAACA190.17858821317793028No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCGACGTGAACCGTTAAACA170.15978945389604288No Hit
CGGAAGGATCATTATCACACCAAAAAACTATCCACGTGAACCGTTAAACA160.15039007425509918No Hit
CGGAAGGATCATTACCACACCAGCAGTGGATGTCTAGGCTCTGTCTCTTA150.14099069461415548No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCCTTAAACA150.14099069461415548No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCTGGTA150.14099069461415548No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCTACGTGAACCGTTAAACA150.14099069461415548No Hit
CGGAAGGATCATACCACACCAAAAAACTATCCACGTGAACCGTTAAACAA140.13159131497321178No Hit
CGGAAGGATCATTACCCCACCAAAAAACTATCCACGTGAACCGTTAAACA140.13159131497321178No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACACA140.13159131497321178No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACATGAACCGTTAAACA130.12219193533226808No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTATCAAA130.12219193533226808No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAAAA130.12219193533226808No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTTAACA110.10339317605038068No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACC110.10339317605038068No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACAGTTAAACA110.10339317605038068No Hit
CGGAAGGATCATTACCACACCAAAAACCTATCCACGTGAACCGTTAAACA110.10339317605038068No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)