FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi682.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi682.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21232
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC1175255.35041446872645No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATTAAA488122.988884702336097No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC1430.6735116804822909No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACTGTATTAAA1150.5416352675207234No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCACGTGAACTGTATTAAAA1050.4945365486058779No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA920.4333082140165787No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC730.34382064807837226No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC710.33440090429540315No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACCGTATCAAC680.3202712886209495No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTATCAAC670.31556141672946497No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC660.31085154483798044No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACCC650.30614167294649586No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCAACGTGAACTGTATTAAA630.29672192916352674No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATTAAA600.2825923134890731No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC590.2778824415975885No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC550.25904295403165034No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAC550.25904295403165034No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC520.24491333835719667No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC500.2354935945742276No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC490.23078372268274303No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA490.23078372268274303No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC490.23078372268274303No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC480.22607385079125847No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACCGTATTAAA470.22136397889977394No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC460.21665410700828935No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC450.21194423511680482No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC440.2072343632253203No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC440.2072343632253203No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC370.17426525998492842No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAC360.16955538809344384No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAC320.15071590052750566No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAC310.1460060286360211No Hit
CGGAAGGATCATTACCACCTAAAAAACTTCCACGTGAACTGTATTAAAAC310.1460060286360211No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCGCGTGAACTGTATTAAA300.14129615674453655No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC300.14129615674453655No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGGACTGTATTAAA290.136586284853052No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTATCAAC290.136586284853052No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC290.136586284853052No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAGCTGTATTAAA290.136586284853052No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAC290.136586284853052No Hit
CGGAAGGATCATTACCACGAGACACCAGCAGTGGATGTCTAGGCTCTGTC270.1271665410700829No Hit
CGGAAGGATCATTACCACACCTAAAAAGCTTCCACGTGAACTGTATTAAA270.1271665410700829No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATTAGA260.12245666917859833No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTTCCACGTGAACTGTATTAAA260.12245666917859833No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTAAACCGTATCAAC260.12245666917859833No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACAGTATCAAC250.1177467972871138No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATTAAG230.10832705350414468No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTGTTAAA230.10832705350414468No Hit
CGGAAGGATCATTACCACACCTAAAGAACTTCCACGTGAACTGTATTAAA220.10361718161266015No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCATGTGAACCGTATCAAC220.10361718161266015No Hit
CGGAAGGATTATTACCACACCTAAAAAACTTCCACGTGAACTGTATTAAA220.10361718161266015No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCATGTGAACTGTATCAAA220.10361718161266015No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)