FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi675.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi675.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24001
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT1973682.22990708720471No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCCCTTTGTAT3251.3541102454064413No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATTG1600.6666388900462481No Hit
CGGAAGGATCATTACCACACCAAAAAGTATCCACGTGAACCACTTTGTAT1090.4541477438440065No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT1060.4416482646556394No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCACTTTGTAT870.36248489646264737No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTCTGTAT790.329152951960335No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCACTTTGTAT790.329152951960335No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACCTTGTAT780.32498645889754596No Hit
CGGAAGGATTATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT750.31248697970917877No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCACTTTGTAT730.3041539935836007No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT670.2791550352068664No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTCGTAT650.27082204908128826No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCACTTTGTAT610.2541560768301321No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCACTTTGTAT560.2333236115161868No Hit
CGGAAGGATCATTACCACACCAAAAACTATCAACGTGAACCACTTTGTAT560.2333236115161868No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCACTTTGTAT540.22499062539060874No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCACTTTGTAT540.22499062539060874No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTTAACCACTTTGTAT530.2208241323278197No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT530.2208241323278197No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCACTTTGTAT490.20415816007666346No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGCAT480.19999166701387444No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAC450.18749218782550728No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTAAACCACTTTGTAT420.17499270863714012No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCACTTTGTAT410.17082621557435107No Hit
CGGAAGGATCATTACCACACCAAAACTATCCACGTGAACCACTTTGTATT410.17082621557435107No Hit
CGGAAGGATCATTACCACACCAGAAACTATCCACGTGAACCACTTTGTAT380.1583267363859839No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGTGAACCACTTTGTAT380.1583267363859839No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCCCGTGAACCACTTTGTAT370.15416024332319486No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCACTTTGTAT360.14999375026040582No Hit
CGGAAGGATCATTACCACACCAAAAACTATTCACGTGAACCACTTTGTAT360.14999375026040582No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCTCTTTGTAT320.1333277780092496No Hit
CGGAAGGATCATACCACACCAAAAACTATCCACGTGAACCACTTTGTATT290.12082829882088246No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTGT290.12082829882088246No Hit
CGGAAGGATCATTATCACACCAAAAACTATCCACGTGAACCACTTTGTAT270.11249531269530437No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACATGAACCACTTTGTAT270.11249531269530437No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTATGTAT260.10832881963251531No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAAACACTTTGTAT260.10832881963251531No Hit
CGGAAGGTCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTATT260.10832881963251531No Hit
CGGAAGGATCATTACCACATCAAAAACTATCCACGTGAACCACTTTGTAT250.10416232656972625No Hit
CGGAAGGATCATTACCCCACCAAAAACTATCCACGTGAACCACTTTGTAT250.10416232656972625No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)