FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi674.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi674.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29840
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC1137238.10991957104557No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATTAAA845228.32439678284182No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTATCAAC29309.819034852546917No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACTGTATTAAA2140.7171581769436998No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAC1920.6434316353887399No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCACGTGAACTGTATTAAAA1410.4725201072386059No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA1350.4524128686327078No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC1340.44906166219839144No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATCAAA1290.43230563002680966No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT1270.42560321715817695No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAA1270.42560321715817695No Hit
CGGAAGGATCATTACCACCTAAAAAACTTCCACGTGAACTGTATTAAAAC1030.34517426273458446No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCAACGTGAACTGTATTAAA990.33176943699731903No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACCGTATTAAA880.2949061662198391No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACCGTATCAAC850.2848525469168901No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACCC730.24463806970509383No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATTAAA710.23793565683646115No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC700.23458445040214476No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC670.22453083109919572No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC660.22117962466487937No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC620.20777479892761394No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC580.19436997319034852No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA560.18766756032171583No Hit
CGGAAGGATCATTACCACACCTAAAAAACCTCCACGTGAACTGTATTAAA560.18766756032171583No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTCAACGTGAACTGTATCAA550.18431635388739945No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC520.17426273458445038No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC490.16420911528150134No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACAGTATCAAC490.16420911528150134No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA490.16420911528150134No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA480.16085790884718498No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCAACGTGAACCGTATCAAC470.15750670241286863No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTTCCACGTGAACTGTATTAAA460.1541554959785523No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC450.15080428954423591No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC440.14745308310991956No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGGACTGTATTAAA430.14410187667560323No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCTACGTGAACCGTATCAAC420.14075067024128685No Hit
CGGAAGGATCATTACCACACCTAAAGAACTTCCACGTGAACTGTATTAAA420.14075067024128685No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC410.13739946380697052No Hit
CGGAAGGATCATTACCACTCCAGCAGTGGATGTCTAGGCTCTGTCTCTTA410.13739946380697052No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC400.13404825737265416No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATGAAC400.13404825737265416No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTAAACCGTATCAAC390.1306970509383378No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAC380.12734584450402145No Hit
CGGAAGGATCATTACCACACCTAAAAAACTCCCACGTGAACTGTATTAAA380.12734584450402145No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC370.1239946380697051No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAC370.1239946380697051No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGCGAACTGTATTAAA370.1239946380697051No Hit
CGGAAGGATCATTACCACACCCAAAAAACTTCCACGTGAACTGTATTAAA370.1239946380697051No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTAAACTGTATTAAA350.11729222520107238No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCGCGTGAACTGTATTAAA350.11729222520107238No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAGCTGTATTAAA350.11729222520107238No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATTAAC340.11394101876675602No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC340.11394101876675602No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC330.11058981233243968No Hit
CGGAAGGATCATTACCACACCTAAAAGACTTCCACGTGAACTGTATTAAA320.10723860589812334No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC320.10723860589812334No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTACTAAA320.10723860589812334No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAC320.10723860589812334No Hit
CGGAAGGATTATTACCACACCTAAAAAACTTCCACGTGAACTGTATTAAA310.10388739946380697No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC300.10053619302949061No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)