FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi671.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi671.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6646
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC219132.9671983147758No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA171325.77490219681011No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA94414.204032500752332No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC600.9027986758952753No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTAA340.5115859163406561No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAA290.43635269334938315No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC270.40625940415287387No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC210.3159795365633464No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC210.3159795365633464No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACCC200.30093289196509176No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAA190.2858862473668372No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC190.2858862473668372No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTTCCACGTGAACCGTATCAA180.2708396027685826No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG180.2708396027685826No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAAACC160.24074631357207343No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAA160.24074631357207343No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC150.22569966897381882No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACAGTATCAAA130.19560637977730969No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAA120.18055973517905505No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAA110.1655130905808005No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC110.1655130905808005No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACAGTATCAAC110.1655130905808005No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATAAAA110.1655130905808005No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAC110.1655130905808005No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA100.15046644598254588No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT100.15046644598254588No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAA100.15046644598254588No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAA100.15046644598254588No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAG100.15046644598254588No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCAAGTGAACCGTATCAAA90.1354198013842913No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCAGGTGAACCGTATCAAA90.1354198013842913No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAC90.1354198013842913No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC90.1354198013842913No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC90.1354198013842913No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATAAAC90.1354198013842913No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCATATCAAA90.1354198013842913No Hit
CGGAAGGATCATTACCACCTAAAAAACTTTCCACGTGAACCGTATCAACC80.12037315678603672No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC80.12037315678603672No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTACACGTGAACCGTATCAAA80.12037315678603672No Hit
CGGAAGGATCATTACCACACCTAAAACCTTTCCACGTGAACCGTATCAAC80.12037315678603672No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC80.12037315678603672No Hit
CGGAAGGATCATTACCAAACCTAAAAAACTTTCCACGTGAACCGTATCAA80.12037315678603672No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCGA80.12037315678603672No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC70.10532651218778212No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAAACGTATCAA70.10532651218778212No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTACCAA70.10532651218778212No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC70.10532651218778212No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC70.10532651218778212No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTACACGTGAACCGTATCAAC70.10532651218778212No Hit
CGGAAGGATCATTACCACACCTAAAACCTTTCCACGTGAACCGTATCAAA70.10532651218778212No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAACC70.10532651218778212No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAA70.10532651218778212No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC70.10532651218778212No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)