FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi669.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi669.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15015
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA519134.57209457209457No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCTGGTA339622.617382617382617No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA13529.004329004329005No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT11447.6190476190476195No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA2861.9047619047619049No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT1210.805860805860806No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC1200.7992007992007992No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT1070.7126207126207126No Hit
CGGAAGGATCATTACCACACCAAAAAAACTCTCCACGTGAATCTGTACTG930.6193806193806194No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAACCGTTGTA880.5860805860805861No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCCAGCAGTGGATGTCTAGGCT850.5661005661005661No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA740.49284049284049286No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAA580.3862803862803863No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT580.3862803862803863No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAA490.32634032634032634No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACTGTCTGGTACC350.2331002331002331No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACTGTCTGGTA330.21978021978021978No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTCTGGTA330.21978021978021978No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAAACC310.20646020646020646No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAG280.1864801864801865No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA260.17316017316017315No Hit
CGGAAGGATCATTACCACACCAAAAAACTTACCACGTGAATCTGTACTTT260.17316017316017315No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAA260.17316017316017315No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAA250.1665001665001665No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG250.1665001665001665No Hit
CGGAAGGATCATTACCACACCAAAAAACCTTACCACGTGAATCTGTACTT240.15984015984015984No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTATCAAA230.15318015318015318No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAA220.14652014652014653No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTATCAAA220.14652014652014653No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAA210.13986013986013987No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAA210.13986013986013987No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACTGTCTGGTA210.13986013986013987No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAA210.13986013986013987No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAA200.1332001332001332No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAA200.1332001332001332No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCTGTCTGGTA200.1332001332001332No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTTAAACA200.1332001332001332No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAA190.12654012654012653No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAA180.11988011988011987No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACTGTCTGGTA180.11988011988011987No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACTGTCTGGTA170.11322011322011322No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA170.11322011322011322No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGAACCGTTAAACAAG170.11322011322011322No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAA160.10656010656010656No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAA160.10656010656010656No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)