FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOATH662.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOATH662.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3969
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA169242.63038548752834No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT81520.53413958175863No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC1934.862685815066768No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA1383.4769463340891913No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA401.0078105316200554No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC320.8062484252960445No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTATCAAAC260.655076845553036No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAA240.6046863189720333No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA210.5291005291005291No Hit
CGGAAGGATCATTACCACACCAAAAACTATCAACGTGAACCACTTTGTAT150.3779289493575208No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACAGTATCAAA130.327538422776518No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAACTTTGTAT120.30234315948601664No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAA110.2771478961955152No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCCCTTTGTAT100.25195263290501385No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCAATTTGTAT100.25195263290501385No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAA90.22675736961451248No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA90.22675736961451248No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAA90.22675736961451248No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAG90.22675736961451248No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTAATG80.20156210632401111No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATAAAA80.20156210632401111No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCACTTTGTAT70.1763668430335097No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAA70.1763668430335097No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTACACGTGAACCGTATCAAA70.1763668430335097No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAA70.1763668430335097No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACTGTCTTAC70.1763668430335097No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACGTTGTAT70.1763668430335097No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAA60.15117157974300832No Hit
CGGAAGGATCATTACCACACCAAAAACTTTCCACGTGAACCGTATCAAAC60.15117157974300832No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAA60.15117157974300832No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTATCAAA60.15117157974300832No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAGCAA60.15117157974300832No Hit
CGGAAGGATCATTACCACACCAAAAAATATCCACGTGAACCACTTTGTAT60.15117157974300832No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTCTGTAT60.15117157974300832No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCAAGTGAACCACTTTGTAT60.15117157974300832No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCACTTTGTAT50.12597631645250693No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAA50.12597631645250693No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC50.12597631645250693No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCTTATCAAA50.12597631645250693No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCACTTTGTAT50.12597631645250693No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAAACC50.12597631645250693No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAA50.12597631645250693No Hit
CGGAAGGATCATTACCACACCTAAAACCTTTCCACGTGAACCGTATCAAA50.12597631645250693No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCAAGTGAACCGTATCAAA50.12597631645250693No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCCCGTGAACCGTATCAAA50.12597631645250693No Hit
CGGAAGGATAATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA50.12597631645250693No Hit
CGGAAGGATCATTACCAAACCTAAAAACTTTCCACGTGAACCGTATCAAA50.12597631645250693No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAA50.12597631645250693No Hit
CGGAAGGATCATTACAACACCTAAAAACTTTCCACGTGAACCGTATCAAA50.12597631645250693No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATTG50.12597631645250693No Hit
CGGAAGGATCATACCACACCTAAAAACTTTCCACGTGAACCGTATCAAAC40.10078105316200556No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGA40.10078105316200556No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAA40.10078105316200556No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAA40.10078105316200556No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTATGTAT40.10078105316200556No Hit
CGGAAGGATCATTACCAAACCAAAAACTATCCACGTGAACCACTTTGTAT40.10078105316200556No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTAAACCGTATCAAA40.10078105316200556No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTATCCACGTGAACCGTTAAT40.10078105316200556No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAA40.10078105316200556No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACATTGTAT40.10078105316200556No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAAACACTTTGTAT40.10078105316200556No Hit
CGGAAGGATCATTACCACACCAAAAACTATTCACGTGAACCACTTTGTAT40.10078105316200556No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCACTTTGTAT40.10078105316200556No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTTT40.10078105316200556No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTGTGTAT40.10078105316200556No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCGACGTGAACCGTATCAAA40.10078105316200556No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAA40.10078105316200556No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGTACCGTATCAAA40.10078105316200556No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT40.10078105316200556No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAA40.10078105316200556No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)