FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOATH655.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOATH655.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3155
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT281089.06497622820919No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCCCTTTGTAT381.2044374009508716No Hit
CGGAAGGATCATTACCACGTCGTCGTCAGCAGTGGATGTCTAGGCTCTGT210.6656101426307449No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC120.3803486529318542No Hit
CGGAAGGATTATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT90.28526148969889065No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTTAACCACTTTGTAT80.25356576862123614No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCCCGTGAACCACTTTGTAT70.22187004754358164No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT60.1901743264659271No Hit
CGGAAGGATCATTACTACACCAAAAACTATCCACGTGAACCACTTTGTAT50.15847860538827258No Hit
CGGAAGGATCATTACCACACCAAAAACTATCAACGTGAACCACTTTGTAT50.15847860538827258No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT50.15847860538827258No Hit
CGGAAGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTATT40.12678288431061807No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT40.12678288431061807No Hit
TGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT40.12678288431061807No Hit
CGGAAGAATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT40.12678288431061807No Hit
CGGAAGGATCATTACCGCACCAAAAACTATCCACGTGAACCACTTTGTAT40.12678288431061807No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG40.12678288431061807No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCATTTTGTAT40.12678288431061807No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGTGAACCACTTTGTAT40.12678288431061807No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTATGTAT40.12678288431061807No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)