FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOATH628.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOATH628.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10695
Sequences flagged as poor quality0
Sequence length301
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCAAC408938.232819074333804No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT139413.034128097241702No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT113510.61243571762506No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA10489.798971482000935No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCCCGTGAACCGTATCAAC4243.9644693782141185No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC2902.7115474520804117No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC2061.9261337073398783No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA1521.42122487143525No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGAAA860.8041140719962598No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA630.5890603085553997No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCACCGTGAACCGTATCAAC450.42075736325385693No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGTCAGAAAT300.2805049088359046No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCCTATCAAC240.22440392706872372No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTCCCCCGTGAACCGTATCAAC220.2057035998129967No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATTAAC220.2057035998129967No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTTCCACGTGAACCGTATCAA190.17765310892940625No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAGCCGTATCAAC190.17765310892940625No Hit
CGGAAGGATCATTACCACACCTAAAGACTTCCCCCGTGAACCGTATCAAC180.16830294530154277No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGGACCGTATCAAC160.14960261804581582No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGCTTTGTAT150.1402524544179523No Hit
CGGAAGGATCATTACCACACCTAAAAACTCCCCCCGTGAACCGTATCAAC150.1402524544179523No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTACCAAC140.13090229079008883No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTATCAACC130.12155212716222534No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCGAC130.12155212716222534No Hit
CGGAAGGATCATTACCACACCTAAAACTTCCCCCGTGAACCGTATCAACC130.12155212716222534No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCACCCGTGAACCGTATCAAC130.12155212716222534No Hit
CGGAAGGATTATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCAAC120.11220196353436186No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACTGTATCAAC120.11220196353436186No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGCATCAAC110.10285179990649836No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCCCTTTGTAT110.10285179990649836No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTCCCCCGTGAACCGTATCAAC110.10285179990649836No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCCACGTGAACCGTATCAA110.10285179990649836No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGCGAACCGTATCAAC110.10285179990649836No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)