FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOATH627.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOATH627.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12603
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT787162.45338411489328No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA132010.473696738871698No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT7856.228675712132032No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT2331.8487661667856858No Hit
CGGAAGGATCATTACCACATCTCCGCAGCAGTGGATGTCTAGGCTCTGTC1250.9918273426961834No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC1220.9680234864714751No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCCCTTTGTAT940.7458541617075299No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT540.42846941204475125No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG380.3015155121796398No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCACTTTGTAT360.28564627469650083No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTGTAATT350.27771165595493136No Hit
CGGAAGGATTATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT340.2697770372133619No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATTG340.2697770372133619No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCACTTTGTAT320.253907799730223No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT310.2459731809886535No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACTGTCGTTATT290.23010394350551455No Hit
CGGAAGGATCATTACCACACCAAAAAACCTTTCCACGTGAACCGTTGTAA280.22216932476394508No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCACTTTGTAT270.21423470602237563No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTTAACCACTTTGTAT260.20630008728080618No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCACTTTGTAT250.1983654685392367No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCACTTTGTAT240.19043084979766722No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCACTTTGTAT220.17456161231452827No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT210.16662699357295882No Hit
CGGAAGGATCATTACCACACCAAAACTATCCACGTGAACCACTTTGTATT210.16662699357295882No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCACTTTGTAT210.16662699357295882No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCACTTTGTAT200.15869237483138934No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCACTTTGTAT190.1507577560898199No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAACCGTTGTA180.14282313734825042No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCACTTTGT180.14282313734825042No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGCAT170.13488851860668094No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAC170.13488851860668094No Hit
CGGAAGGATCATTACCACACCAAAAACTATTCACGTGAACCACTTTGTAT170.13488851860668094No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTAAACCACTTTGTAT170.13488851860668094No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACTACTTTGTAT160.1269538998651115No Hit
CGGAAGGATCATTACCACACCAAAAACTATCAACGTGAACCACTTTGTAT150.119019281123542No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT150.119019281123542No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACCTTGTAT150.119019281123542No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCCCGTGAACCACTTTGTAT150.119019281123542No Hit
CGGAAGGATCATTACCCCACCAAAAACTATCCACGTGAACCACTTTGTAT150.119019281123542No Hit
CGGAAGGATCATACCACACCAAAAACTATCCACGTGAACCACTTTGTATT140.11108466238197254No Hit
CGGAAGGATCATTACCACACCAAAAGAACTTTCCACGTGAACCGTTGTAA140.11108466238197254No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTACACGTGAACCGTTGTAA140.11108466238197254No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTCGTAT140.11108466238197254No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTATGTAT130.10315004364040309No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGTGAACCACTTTGTAT130.10315004364040309No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)