FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOATH609.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOATH609.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3927
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC273469.62057550292843No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA1323.361344537815126No Hit
CGGAAGGATCATTACCACATCTCCGACCACGAGACCAGCAGTGGATGTCT852.1645021645021645No Hit
CGGAAGGATCATTACCACATCTCCGAGCAGCAGTGGATGTCTAGGCTCTG832.1135727018079957No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGAGTACGATCTC631.6042780748663104No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAAATGTTCTGT380.9676597911892029No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC320.8148714031066971No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAACCGTTGTA300.7639419404125287No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCAGCAGTGGATGT250.6366182836771073No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATGAAC220.5602240896358543No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAC140.35650623885918004No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC120.30557677616501144No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC100.2546473134708429No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC100.2546473134708429No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACTGTCTGTA100.2546473134708429No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC100.2546473134708429No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACAGTATCAAC100.2546473134708429No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC90.2291825821237586No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC90.2291825821237586No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTTGCAA90.2291825821237586No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC90.2291825821237586No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCCAC90.2291825821237586No Hit
CGGAAGGTCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA80.2037178507766743No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA80.2037178507766743No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAACA70.17825311942959002No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAC70.17825311942959002No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTACACGTGAACCGTATCAAC70.17825311942959002No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTAAACCGTATCAAC70.17825311942959002No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCTACGTGAACCGTATCAAC70.17825311942959002No Hit
CGGAAGGATCATACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA60.15278838808250572No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCGACGTGAACCGTATCAAC60.15278838808250572No Hit
CGGAAGGATCATTACCAAACCTAAAAACTTTCCACGTGAACCGTATCAAC60.15278838808250572No Hit
CGGAAGGATCATTACAACACCTAAAAACTTTCCACGTGAACCGTATCAAC60.15278838808250572No Hit
GGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA60.15278838808250572No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATAAAC60.15278838808250572No Hit
CGGAAGGATCATTACCACACCTCCGAGCCCACGAGACTGAGTACGATCTC50.12732365673542145No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC50.12732365673542145No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTGCAAC50.12732365673542145No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCACC50.12732365673542145No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC50.12732365673542145No Hit
CGGAAGGATCATTACCACACCTAAAACCTTTCCACGTGAACCGTATCAAC50.12732365673542145No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC50.12732365673542145No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACGGTATCAAC40.10185892538833714No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC40.10185892538833714No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC40.10185892538833714No Hit
CGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA40.10185892538833714No Hit
CGGAAGGATCATTACCACATCTGACGCTGCCGACGACAGCAGTGGATGTC40.10185892538833714No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCTGGTA40.10185892538833714No Hit
CGGAAGGATCATTACCACACCTAAACACTTTCCACGTGAACCGTATCAAC40.10185892538833714No Hit
CGGAAGGATCATTACCACACCTAAAAATTTTCCACGTGAACCGTATCAAC40.10185892538833714No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC40.10185892538833714No Hit
AGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC40.10185892538833714No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAATCGTATCAAC40.10185892538833714No Hit
CGGAAGGACATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA40.10185892538833714No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGTAAA40.10185892538833714No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAC40.10185892538833714No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)