FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOATH578.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOATH578.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5909
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC195033.00050770011846No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT126021.32340497546116No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTATCCACGTGAACCGTATAAG74512.607886275173463No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT3535.973938060585547No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCGAGAGTTATCTC1863.1477407344728383No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC891.5061770181079708No Hit
CGGAAGGATCATTACCACGTCGGCAGCAGTGGATGTCTAGGCTCTGTCTC460.7784735149771534No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT280.4738534438991369No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT260.4400067693349129No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA260.4400067693349129No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC240.4061600947706888No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC230.3892367574885767No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA220.3723134202064647No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC200.33846674564224066No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC200.33846674564224066No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCACTTTGTAT180.3046200710780166No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCCCTTTGTAT170.28769673379590455No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTATCCACGTGAACCACTTTGT160.2707733965137925No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC160.2707733965137925No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTATAAG140.23692672194956846No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT140.23692672194956846No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC130.22000338466745645No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATTG130.22000338466745645No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC110.18615671010323234No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC110.18615671010323234No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC100.16923337282112033No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCACTTTGTA100.16923337282112033No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCACTTTGTAT100.16923337282112033No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT100.16923337282112033No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCGAGCGTTATCTC100.16923337282112033No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTACCCACGTGAACCGTATAAG90.1523100355390083No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC90.1523100355390083No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTATCCACGTGGACCGTATAAG90.1523100355390083No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCACTTTGTAT90.1523100355390083No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC80.13538669825689625No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGATGTGTATAAGAGACA80.13538669825689625No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTAAACCGTATCAAC80.13538669825689625No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAACA80.13538669825689625No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAC80.13538669825689625No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACACCAGCAGTGGAT80.13538669825689625No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCACTTTGTAT70.11846336097478423No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACCTTGTAT70.11846336097478423No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCGAGAGTTAACTC70.11846336097478423No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC70.11846336097478423No Hit
CGGAAGGATCATTACCACGCCTAAAAACCTATCCACGTGAACCGTATAAG70.11846336097478423No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTCGTAT70.11846336097478423No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTATACACGTGAACCGTATAAG70.11846336097478423No Hit
CGGAAGGATCATTACCACGCCTAAAAACTATCCACGTGAACCGTATAAGC60.1015400236926722No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC60.1015400236926722No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTATCCACGTGAACCGTATCAA60.1015400236926722No Hit
GGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTATT60.1015400236926722No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTATCCACGTGAACCGTATAGG60.1015400236926722No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTATCCACGTGAGCCGTATAAG60.1015400236926722No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC60.1015400236926722No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTATCCACGTGAACCGTATGAG60.1015400236926722No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC60.1015400236926722No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)