FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOATH576.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOATH576.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences178
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACCGTCAGCAGTGGATGTCTAGGCTCTGTCTCTT12670.78651685393258No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG63.3707865168539324No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA42.247191011235955No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC31.6853932584269662No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT21.1235955056179776No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT21.1235955056179776No Hit
CGGAAGGATCATTACCACCGTCAGCAGTGGATGTCTAGGCTCTGTTTCTT21.1235955056179776No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCCCGTGAACCGTATCAAA10.5617977528089888No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTTCGTAGGTG10.5617977528089888No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA10.5617977528089888No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTACACGTGAACCGTATTCA10.5617977528089888No Hit
CGGAAGGATCATTACAACCGTCAGCAGTGGATGTCTAGGCTCTGTCTCTT10.5617977528089888No Hit
CGGAAGGATCATTACCACCGTCAGCAGTGGTGTCTAGGCTCTGTCTCTTA10.5617977528089888No Hit
CGGAAGGATCATTACCACCGTCAGCAGTGGATGTCTAGGCTCTTCTCTTA10.5617977528089888No Hit
CGGAAGGATCATTACTACCGTCAGCAGTGGATGTCTAGGCTCTGTCTCTT10.5617977528089888No Hit
CGGAAGGATCATTACCACCGTCAGCAGTGCATGTCTAGGCTCTGTCTCTT10.5617977528089888No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG10.5617977528089888No Hit
CGGAAGGATCATTACCACCGTCAGCAGTGGATGTATAGGCTCTGTCTCTT10.5617977528089888No Hit
CGGAAGGATCATTACCACCGTCAGCAGTGGATGTCTAGGCTCTGTTCTTA10.5617977528089888No Hit
CGGGAGGATCATTACCACCGTCAGCAGTGGATGTCTAGGCTCTGTCTCTT10.5617977528089888No Hit
CGGAAGGATCATTACCACCGTCAGCAGTGGATGTCTAGGCTCTGTCTTTT10.5617977528089888No Hit
CGGAAGGATCATTACCACCGTCAGCAGTGGAAGTCTAGGCTCTGTCTCTT10.5617977528089888No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAC10.5617977528089888No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCACTTTGTAT10.5617977528089888No Hit
CGGAAGGATCATTACCACCGTCAGCAGTGGTTGTCTAGGCTCTGTCTCTT10.5617977528089888No Hit
TGGAAGGATCATTACCACCGTCAGCAGTGGATGTCTAGGCTCTGTCTCTT10.5617977528089888No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.5617977528089888No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCAGGTAAACAACTTGGTAT10.5617977528089888No Hit
CGGAAGGATCATTACCACCGTCAGCAGTGGATGTCTAGGCTCTGACTCTT10.5617977528089888No Hit
CGGAAGGATCATTACCACCGTCAGCAGTGGATGTCTAGGCTCTGTCTTTA10.5617977528089888No Hit
CGGTAGGATCATTATCACAGTCAGCAGTGGATGTCTAGGCTCTGTCTCTT10.5617977528089888No Hit
CGGAAGGACCATTACCACCGTCAGAAGTGGATGTCTAGGCTCTGACTCTT10.5617977528089888No Hit
AGCCTAGACATCCACTGCTGACGGTGGTAATGATCCTTCCGCTGTCTCTT10.5617977528089888No Hit
CGGAAGGATCATTACCACCGTCAGCAGTGGATGTCTAGGCTCGGTCTCTT10.5617977528089888No Hit
CGGAAGGATCATTACCACCGTCAGCAGTGGATGTCTAGGCTCCGTCTCTT10.5617977528089888No Hit
CGAAAGGATCATTACCACCGTCAGCAGTGGATGTCTAGGCTCTGTCTCTT10.5617977528089888No Hit
CGGAAGGATCATTACCACCGTAAGAAGTGGATGTCTAAGCTATGTCTCTT10.5617977528089888No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTTGTAA10.5617977528089888No Hit
CGGAATGATCATTACCACCGTCAGCAGTGGATGTCTAGGCCCTGTCTCTT10.5617977528089888No Hit
CGGAAGGATCATTACCACCGTCAGCAGTGGAGGGCTAGGCTCAGGCGCTT10.5617977528089888No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)