FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-GyrBChi188.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-GyrBChi188.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16128
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCTGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG430.2666170634920635No Hit
AGGCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG280.1736111111111111No Hit
AGGCCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG280.1736111111111111No Hit
AGGCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG250.15500992063492064No Hit
AGGCCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG250.15500992063492064No Hit
AGGCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG250.15500992063492064No Hit
AGGCCGGGTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG240.1488095238095238No Hit
AGGCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG240.1488095238095238No Hit
AGTCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG230.14260912698412698No Hit
AGGCCGGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG220.13640873015873015No Hit
AGACCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG220.13640873015873015No Hit
AGTCCAGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG220.13640873015873015No Hit
AGGCCTGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG220.13640873015873015No Hit
AGTCCTGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG220.13640873015873015No Hit
AGGCCAGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG210.13020833333333331No Hit
AGACCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG210.13020833333333331No Hit
CGGCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG210.13020833333333331No Hit
AGGCCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG210.13020833333333331No Hit
AGGCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG210.13020833333333331No Hit
AGACCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG200.1240079365079365No Hit
AGGCCTGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG200.1240079365079365No Hit
AGTCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG200.1240079365079365No Hit
AGTCCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG200.1240079365079365No Hit
AGGCCGGCTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG200.1240079365079365No Hit
AGGCCAGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG200.1240079365079365No Hit
AGACCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG200.1240079365079365No Hit
AGTCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG200.1240079365079365No Hit
AGGCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG190.11780753968253968No Hit
AGGCCAGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG190.11780753968253968No Hit
AGGCCTGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG190.11780753968253968No Hit
AGGCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG190.11780753968253968No Hit
CGGCCTGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG190.11780753968253968No Hit
CGGCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG180.11160714285714285No Hit
AGGCCCGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG180.11160714285714285No Hit
AGGCCTGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG180.11160714285714285No Hit
CGGCCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG180.11160714285714285No Hit
AGCCCGGGTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG180.11160714285714285No Hit
AGTCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG180.11160714285714285No Hit
CGGCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG170.10540674603174603No Hit
AGACCGGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG170.10540674603174603No Hit
CGGCCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG170.10540674603174603No Hit
AGTCCTGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG170.10540674603174603No Hit
CGGCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG170.10540674603174603No Hit
AGGCCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG170.10540674603174603No Hit
AGGCCGGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG170.10540674603174603No Hit
CGTCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG170.10540674603174603No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)