FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-GyrBChi187.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-GyrBChi187.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19948
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG390.19550832163625428No Hit
AGGCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG380.19049528774814517No Hit
AGGCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG380.19049528774814517No Hit
AGGCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG370.1854822538600361No Hit
AGGCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG360.180469219971927No Hit
AGGCCGGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG330.16543011830759977No Hit
AGTCCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG310.1554040505313816No Hit
AGGCCTGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG300.1503910166432725No Hit
AGGCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG290.14537798275516342No Hit
AGACCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG290.14537798275516342No Hit
AGGCCGGCAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG280.14036494886705433No Hit
AGACCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG270.13535191497894528No Hit
AGACCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG270.13535191497894528No Hit
AGGCCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG270.13535191497894528No Hit
AGACCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG260.13033888109083616No Hit
AGTCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG260.13033888109083616No Hit
AGACCGGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG260.13033888109083616No Hit
AGTCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG260.13033888109083616No Hit
AGGCCAGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG260.13033888109083616No Hit
AGTCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG260.13033888109083616No Hit
AGGCCAGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG250.1253258472027271No Hit
CGTCCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG250.1253258472027271No Hit
CGGCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG240.120312813314618No Hit
AGTCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG240.120312813314618No Hit
AGGCCTGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG230.11529977942650893No Hit
AGACCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG230.11529977942650893No Hit
AGCCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG230.11529977942650893No Hit
AGCCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG230.11529977942650893No Hit
AGGCCGGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG220.11028674553839983No Hit
AGACCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG220.11028674553839983No Hit
AGGCCAGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG220.11028674553839983No Hit
AGGCCAGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG220.11028674553839983No Hit
AGCCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG220.11028674553839983No Hit
AGGCCAGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG210.10527371165029076No Hit
AGGCCCGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG210.10527371165029076No Hit
AGGCCAGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG210.10527371165029076No Hit
CGGCCCGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG210.10527371165029076No Hit
AGGCCTGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG210.10527371165029076No Hit
AGACCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG210.10527371165029076No Hit
AGGCCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG210.10527371165029076No Hit
AGACCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG200.10026067776218166No Hit
AGGCCGGCTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG200.10026067776218166No Hit
AGTCCTGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG200.10026067776218166No Hit
AGGCCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG200.10026067776218166No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)