FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-GyrBATH23.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-GyrBATH23.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24247
Sequences flagged as poor quality0
Sequence length301
%GC64

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCGGGGATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA450.18558996989318266No Hit
AGGCCGGGGATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA440.18146574834000084No Hit
CGGCCGGGGATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA370.15259619746772796No Hit
AGGCCGGGTATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA360.14847197591454614No Hit
AGGCCGGCGATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA330.13609931125500063No Hit
AGGCCTGGGATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA330.13609931125500063No Hit
CGGCCGGGGATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA290.11960242504227327No Hit
AGTCCGGGGATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA280.11547820348909144No Hit
CGGCCCGGGATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA280.11547820348909144No Hit
AGACCGGGGATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA270.11135398193590959No Hit
AGGCCAGGGATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA270.11135398193590959No Hit
AGTCCGGGTATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA270.11135398193590959No Hit
AGGCCCGGGATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA270.11135398193590959No Hit
CGGCCTGGGATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA260.10722976038272775No Hit
AGGCCAGGGATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA260.10722976038272775No Hit
CGGCCTGCGATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA260.10722976038272775No Hit
AGCCCGGGGATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA250.10310553882954593No Hit
CGGCCGGCAATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA250.10310553882954593No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)