FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-GyrBATH21.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-GyrBATH21.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2685
Sequences flagged as poor quality0
Sequence length301
%GC64

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCTGGGATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA40.14897579143389197No Hit
AGACCGGGGATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA40.14897579143389197No Hit
AGGCCGGGCATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA30.11173184357541899No Hit
AGGCCGGCTATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA30.11173184357541899No Hit
AGCCCGGGGATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA30.11173184357541899No Hit
CGCCCGGGGATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA30.11173184357541899No Hit
CGGCCGGGAATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA30.11173184357541899No Hit
AGTCCGGGTATGTACATTGGCTCCACCGGCGAGCGCGGCCTGCACCACAT30.11173184357541899No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)