FastQCFastQC Report
Fri 14 Jul 2023
000000000-L66WL_l01.1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L66WL_l01.1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5920469
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT145311924.543984606624914No Hit
GAGTAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAAC4359067.362693732540445No Hit
GAGTAACCGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAAC2874034.854395825736104No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG2674384.517175919677985No Hit
GAGTAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGCTAAC2019173.41048994598232No Hit
GAGTAACCGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGCTAAC1337412.2589595520219765No Hit
GAGTAACAGGATTAGATACCCGGGTAGTCCACGCCGTAAACGATGTCAAC688961.1636915926761884No Hit
GAGTAACAGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATAC444460.7507175529506193No Hit
GAGTAACAGGATTAGATACCCGGGTAGTCCACGCCGTAAACGATGCTAAC399350.6745242648850961No Hit
GAGTAACCGGATTAGATACCCGGGTAGTCCACGCCGTAAACGATGTCAAC377720.6379899970762452No Hit
GAGTAACCGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATAC345100.5828930106719585No Hit
GAGTAACCGGATTAGATACCCGGGTAGTCCACGCCGTAAACGATGCTAAC212870.3595492181447112No Hit
GAGTAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGGATAC205820.34764137773544634No Hit
GAGTAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCTAC201580.34047978293611536No Hit
GAGTAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGATAAC187110.3160391516280214No Hit
GAGTAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGCGAAC180910.30556700828937705No Hit
GAGTAACCGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCTAC149980.2533245254725597No Hit
GAGTAACCGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGGATAC131730.22249926483864707No Hit
GAGTAACCGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGATAAC128030.21624975994300452No Hit
GAGTAACCGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGCGAAC122070.2061829898948884No Hit
GAGTAACAGGATTAGATACCCTGTCTCTTATACACATCTCCGAGCCCACG96500.1629938438998667No Hit
GAGTAACAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGAGTGT88940.1502245852482295No Hit
GAGTAACCGGATTAGATACCCTGTCTCTTATACACATCTCCGAGCCCACG74720.12620621778443566No Hit
GAGTAACCGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGAGTGT67020.11320049137999035No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)