FastQCFastQC Report
Tue 7 Nov 2023
000000000-L65MN_l01_n01_undetermined.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L65MN_l01_n01_undetermined.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6742419
Sequences flagged as poor quality0
Sequence length301
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG171517425.438555509528555No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT1220781.8105964639693855No Hit
CTGTAAAGGTAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG565890.8392981806677989No Hit
ACGCCCAAGCAGATCTACACCGATCCGGCCAACCTGTTCGTCGCCAGTTT509510.7556783403701253No Hit
ACGCCCAAGCAGATCTACAACCGCATGCAGAACGTCTATGCCGACCAGCA498380.7391709118047989No Hit
ACGCCCAAGCAGATCTACAACGACCCGGCCAACCTGTTCGTGGCCAGCTT465600.690553345913388No Hit
CTGTAAAGATAAATGGGCCATCTAAAGAGTATGGAGCTGGGATTGACTCG437010.6481501668763096No Hit
TACCCTTACGATGTTCCTGATTACGCTCGAAGATTTCGTTGGGGACTCTG423370.6279200387872661No Hit
ACACCCAAGCAGATCTACACCGATCCGGCCAACCTGTTCGTCGCCAGTTT412560.611887217332533No Hit
ACACCCAAGCAGATCTACAACCGCATGCAGAACGTCTATGCCGACCAGCA388490.5761878637325862No Hit
ACGCCCAAGCAGATTTACAACCGCATGCAGAACGTCTATGCCGACCAGCA370270.5491649213731747No Hit
ACGCCCAAGCAGATCTACAACGATCCGGCCAACCTCTTCGTAGCCAGCTT336730.49942016359410474No Hit
ACACCCAAGCAGATCTACAACGACCCGGCCAACCTGTTCGTGGCCAGCTT319460.47380621109426746No Hit
ACGCCCAAGCAGATTTACACCGATCCGGCCAACCTGTTCGTCGCCAGTTT298980.44343135601629025No Hit
ACACCCAAGCAGATTTACAACCGCATGCAGAACGTCTATGCCGACCAGCA294230.4363864067184196No Hit
CGGTTCGTGCGCTTCTGCGACGCGTTCGAGATCCCGATCGTGACGTTCGT293360.4350960686364938No Hit
TACCCTTACGATGTTCCTGATTACGCTGGGCTCGAAGATTTCGTTGGGGA255250.3785733280592618No Hit
ACACCCAAGCAGATCTACAACGATCCGGCCAACCTCTTCGTAGCCAGCTT243370.3609535390784821No Hit
ACGCCCAAGCAGATCTACAACGATCCCGCCAACCTGTTCGTCGCCAGCTT240280.35637061416681465No Hit
ACGCCCAAGCAGATTTACAACGACCCGGCCAACCTGTTCGTGGCCAGCTT228010.3381723977699992No Hit
ACACCCAAGCAGATTTACACCGATCCGGCCAACCTGTTCGTCGCCAGTTT211350.3134631650747306No Hit
CTGTAAAGATAAATGGGTCCTCTAAAGAGTATGGAGCTGGGATTGACTCG187330.27783796883581396No Hit
ACACCCAAGCAGATCTACAACGATCCCGCCAACCTGTTCGTCGCCAGCTT176100.26118222554842707No Hit
CTGTAAAGCTAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG172830.2563323341370508No Hit
ACGCCCAAGCAGATTTACAACGATCCGGCCAACCTCTTCGTAGCCAGCTT166910.24755210259107302No Hit
CGGTTCGTGCGCTTCTGCGATGCGTTCGAGATCCCGATCGTGACCTTCGT160730.2383862527677381No Hit
CTGTAAAGATAAATGGGACATCTAAAGAGTATGGAGCTGGGATTGACTCG159590.23669546493624913No Hit
ACACCCAAGCAGATTTACAACGACCCGGCCAACCTGTTCGTGGCCAGCTT158630.23527164360446895No Hit
GAGGAGGGAATCGTCCCCGGTGGTGGTACGGCGCTGCTGTACGCGACCAA151390.22453365772729345No Hit
CGGTTCGTCCGCTTCTGCGACGCGTTCGAGATCCCGATCGTGACGTTCGT131920.19565678134212663No Hit
TACCCTTACGATGTTCCTGATTACGCCGTGGGCTCGAAGATTTCGTTGGG131540.19509318539829695No Hit
GAGGAGGGCATCGTCCCCGGTGGTGGTACGGCGCTGCTGTACGCGACCAA131050.19436644326020083No Hit
ACACCCAAGCAGATTTACAACGATCCGGCCAACCTCTTCGTAGCCAGCTT119250.17686530605706943No Hit
CGGTTCGTGCGCTTCTGCGACGCGTTCGAGATCCCGATCGTGACCTTCGT116980.17349856186629753No Hit
TACCCTTACGATGTTCCTGATTACGCTCTACGATTTCGTTTGGGACTCTT115480.171273841035391No Hit
ACGCCCAAGCAGATCTACACCGATCCGGCCAACCTGTTCGTCGCCAGCTT113570.1684410298440367No Hit
ACGCCCAAGCAGATCTACGAGTCGTGGTAAATTTAATCTGGCTGTGGTCC112970.16755114151167405No Hit
GAAGAGGGAATCGTCCCCGGTGGTGGTACGGCGCTGCTGTACGCGACCAA112630.1670468714566686No Hit
TACCCTTACGATGTTCCTGATTACGCGTGGGCTCGAAGATTTCGTTGGGG109060.16175203587911105No Hit
GAGGAGGGAATCGTCCCCGGCGGCGGTACGGCTCTGCTGTACGCAACCAA98890.14666842864556473No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTCTGGAGCTGGGATTGACTCG97030.14390977481524064No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGCGCTGGGATTGACTCG96740.14347966212126537No Hit
GAAGAGGGCATCGTCCCCGGTGGTGGTACGGCGCTGCTGTACGCGACCAA94460.14009808645828745No Hit
ACGCCCAAGCAGATTTACAACGATCCCGCCAACCTGTTCGTCGCCAGCTT93070.1380365118216474No Hit
ACACCCAAGCAGATCTACGAGTCGTGGTAAATTTAATCTGGCTGTGGTCC90520.13425448640910628No Hit
ACGCCCAAGCAGATTTACGAGTCGTGGTAAATTTAATCTGGCTGTGGTCC89450.1326675188830596No Hit
GAGGAAGGAATCGTCCCCGGTGGTGGTACGGCGCTGCTGTACGCGACCAA89060.1320890914670239No Hit
ACACCCAAGCAGATCTACACCGATCCGGCCAACCTGTTCGTCGCCAGCTT86320.12802526808256798No Hit
GAGGAGGGCATCGTCCCCGGCGGCGGTACGGCTCTGCTGTACGCAACCAA84460.1252666142522439No Hit
CTGTAAAGATAAAAGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG83710.12415425383679063No Hit
CTGTAAAGATAAATGGGGCATCTAAAGAGTATGGAGCTGGGATTGACTCG83510.12385762439266976No Hit
TACCCTTACGATGTTCCTGATTACGCTTTGGCTCGAAGATTTCGTTGGGT78990.11715379895553807No Hit
GAGGAGGGAATCGTCCCAGGCGGCGGTACTGCTCTTCTGCGCTCTTCCAC74490.11047963646281846No Hit
ACGCCCAAGCAGATTTACACCGATCCGGCCAACCTGTTCGTCGCCAGCTT74150.109975366407813No Hit
TACCCTTACGATGTTCCTGATTACGCTTGGGCTCGAAGATTTCGTTGGGG73620.10918929838089268No Hit
GAAGAGGGAATCGTCCCCGGCGGCGGTACGGCTCTGCTGTACGCAACCAA73000.10826974710411796No Hit
CTGTAAAGATACATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG72630.10772098263249436No Hit
GAGGAAGGCATCGTCCCCGGTGGTGGTACGGCGCTGCTGTACGCGACCAA71320.10577805977350266No Hit
CGGTTCGTCCGCTTCTGCGATGCGTTCGAGATCCCGATCGTGACCTTCGT69800.10352367599818404No Hit
CTGTAAAGATCAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG69670.10333086685950547No Hit
ACACCCAAGCAGATTTACAACGATCCCGCCAACCTGTTCGTCGCCAGCTT69010.10235198969390659No Hit
ACACCCAAGCAGATTTACGAGTCGTGGTAAATTTAATCTGGCTGTGGTCC68500.10159558461139838No Hit
CTGTAAAGATAAATGGGTCATCTAAAGTGTATGGAGCTGGGATTGACTCG67760.10049805566815116No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)