FastQCFastQC Report
Tue 7 Nov 2023
000000000-L65MN_l01_n01_groPIELPathoPool1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L65MN_l01_n01_groPIELPathoPool1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences469
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG27658.84861407249466No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT4810.23454157782516No Hit
CTGTAAAGGTAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG183.8379530916844353No Hit
CTGTAAAGATAAATGGGCCATCTAAAGAGTATGGAGCTGGGATTGACTCG71.4925373134328357No Hit
TACCCTTACGATGTTCCTGATTACGCTCGAAGATTTCGTTGGGGACTCTG30.6396588486140725No Hit
GAAGAAGGCATCGTCCCAGGCGGCGGTACTGCTCTTCTGCGCTCTTCCAC30.6396588486140725No Hit
TACCCTTACGATGTTCCTGATTACGCATAAGAGTTTGCCAGCCCGCCTAA20.42643923240938164No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGCGCTGGGATTGACTCG20.42643923240938164No Hit
CTGTAAAGATAAATGGGGCATCTAAAGAGTATGGAGCTGGGATTGACTCG20.42643923240938164No Hit
CTGTAACGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG20.42643923240938164No Hit
TACCCTTACGATGTTCCTGATTACGCTGAGCTCAGAGATTTCGCGGCGGA10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCATACTGGTCTGGCAGCCCGCCTTA10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGGTGTGCTCCCAGATTTCGTTGGGGA10.21321961620469082No Hit
TACCCTTACGATGTTCCTGAGTACGCTTTACGATTTAGTTTGGGACTCTT10.21321961620469082No Hit
CTGTAAAGATAAATGGGCCGTCTAAAGAGTATGGAGCTGGGATTGACTCG10.21321961620469082No Hit
CTGTAAAGATAAATGCGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG10.21321961620469082No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTCTGGAGCTGGGATTGCCTCG10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCAGAACGTGCAAACAGCGCGGCTAA10.21321961620469082No Hit
CTGTAAAGGTAAATGGGTCATCTAAAGAGTATGGAGCTGGGATCGACTCG10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCCGTGCGCTCTAATATTTCGTTGCT10.21321961620469082No Hit
GATGAGTCAGCGTCGAACATGCTACATTTATTGCATGAGACGTGGCATTT10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCCGTGGTCTGTAATAGTACGTCGGT10.21321961620469082No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGGATGGAGCTGGGATTGACTCG10.21321961620469082No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGCTTGACTCG10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCTGTGCTCGCAGATTTCGTTGGGGA10.21321961620469082No Hit
CTGTAAAGATAAAGGGGCCATCTAAAGAGTATGGAGCTGGGATTGACTCG10.21321961620469082No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGTCGGGATTGTCTCG10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCCTCGTGTCCTCGAATCCTTCGTTG10.21321961620469082No Hit
GAGGAGGGCATCGTCCCCGGCGGCGGTACGGCTCTGCTGTACGCAACCAA10.21321961620469082No Hit
TACCCTTACGATGTTCCTGTTGACAAAGCTGAACCCTTCTGTCTCTTATA10.21321961620469082No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGTCTCG10.21321961620469082No Hit
CGGTTCGTCCGCTTCTGCGCCGCGTTCGAGATCCCGATCGTGACGTTCGT10.21321961620469082No Hit
GAGGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCACGATGAGTTGGCTGGGGGCCTTA10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCTTATCTCGGAGTTAAAGTTAGGCG10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGGTTTCGGTCTCGAATATTTCGTTGT10.21321961620469082No Hit
CTGTAAAGATAACTGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCGTGGGCGCGCCGGTGTCGTTGGCG10.21321961620469082No Hit
CTGTAAAGATAAATGGGTCATCTAAAGCGTATGTTGCTTGGATTGACTCG10.21321961620469082No Hit
TACCCTTACGGTGTTCCTGATTACGCTCAAAGATTGCGCTTGGGGCTCTT10.21321961620469082No Hit
GATGAGTCAGCGTCGAACATGCACCCTCTATTGCATGATACGTGGCATTT10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCGTCGTGGCTCGAAGGTTTCGTTGG10.21321961620469082No Hit
CGGTTCGTCCGCTTCTGCTATGCGTTCGTTATCCCGCTCGTCACCTTCGT10.21321961620469082No Hit
GAAGCGGTCATCGTCCCCGGCGGCGGTTCGGCTCTGCTTTACGCGCACAA10.21321961620469082No Hit
CTGTAAAGATAAATGGGTCATCTAACGAGTATGGAGCTGGGGTTGACTCG10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTGTTGACAAAGCTGAACCCTTCTTTCTCT10.21321961620469082No Hit
CGGTTCGTGCGCTTCTGCGATGCGTTCGATATTCCGATCGTCACCTTCGT10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCCGGGGGCTCTAATAGTTCTTTGGG10.21321961620469082No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACACG10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGGTTCGTGCCTCGAAAGTCCCGCTGA10.21321961620469082No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTTGCATTT10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCCTCGTGGCTCGAAGATTTCGTTGG10.21321961620469082No Hit
GATGAGTCAGCGTCGAACACGCAACATTTATTGCATGATACGTGGCATTT10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCGGCGCTGGCAGATTTCGTTGGGGA10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCTCGAAGACTTCGTTGGGGACTCTG10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCTGGGCTCTAAGATTTCGTTGGGGA10.21321961620469082No Hit
TACCCCTACGATGTTCCTGATTACGCTCTACTATTTTGTTGCGGGCCTTT10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCTGTGTTCTCAGATTGCGCGGCTGA10.21321961620469082No Hit
GAGGAAGGCATCGTCCCCGGTGGTGGTACGGCTTTGCTGTACGCGACCAA10.21321961620469082No Hit
TACCCTTACGCTGTTCCTGCGTACGCTTTGGCACGAAGATTTCGTTGGGT10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCGTCCTCCATTAGTTCGTTCGGGAC10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGGTCTGTGTGCTCGAAGCTTGCCTTA10.21321961620469082No Hit
CGGTTCGTCCGCGTCTGCAACGCGTTCGATATCCCGCTCGTGACGTTCGT10.21321961620469082No Hit
TACCCTTACTATGTTCCTGATTACGCTCATAGATATTGCTGGGCGCCTCA10.21321961620469082No Hit
TACCCTTACGCTGTTCCTGATAACGTCTAGCCATGCGATTCGTGTTAAAT10.21321961620469082No Hit
GAAGAGGGCATAGTCCCCGGTGGTGGTCCGGCTCTGCTTTACGCTCCCAA10.21321961620469082No Hit
CTGTAAAGATAAATGTGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG10.21321961620469082No Hit
GAAGAGGGAATCGTCCCAGGCGGCGGTACTGCTCTTCTGAGCTCTTCCAC10.21321961620469082No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTAGGGAGCTGGGATTGACTCG10.21321961620469082No Hit
CTGTAAAGATAAACGGGCCATCTAAAGAGTATGGAGCTGGGATTGACTCG10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTATGCATAATGTGCACGCAGCGCGCCTAA10.21321961620469082No Hit
AATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT10.21321961620469082No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTTACTCG10.21321961620469082No Hit
CTGTCAAGATAAATGTGTCATCTAACGAGTATGGAGCTGGGATTGACTCT10.21321961620469082No Hit
AGTCCCCAACGAAATCTTCGAGCCCACGAGACGTCTGCTAATCTCGTATG10.21321961620469082No Hit
CGGTTCGTGCGCTTCTGCGATGCGTTCGAGATCCCGATCGTGACCTTCGT10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCTGTGCTCTCAGATTTCGTTGGGGA10.21321961620469082No Hit
GAAGAGGGAATCGTCCCCGGTGGCGGCACGGCTTTGCTGTACGCGACCAA10.21321961620469082No Hit
CTGTAAAGATAAAGGGGTCCTCTAAAGAGGATGGAGCTGGGATTGACTCG10.21321961620469082No Hit
TACCCTTACTATGTTCCTGATTACGCTGGGCTCGAAGATTTATTTGTGGG10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTGTTGTCGAAGCTGACTCCGTCTCCCTCG10.21321961620469082No Hit
GATGAGTCAGCGTCGAACATGCAACATTTAGTGCATGATACGTGGCATTT10.21321961620469082No Hit
GAAGCCGTCATCGTCCCCGGTGGCGGCCCCGCTCTGCTTTACGCTCCCAA10.21321961620469082No Hit
TACCCTTACGCTGTTCCTGATTACGCAGTGTTCAGAGACTGCGCGCCGGA10.21321961620469082No Hit
CTGTAAAGGTAAATGGGTCATCTAAAGAGTATGGCGCTGGGATTGACTCG10.21321961620469082No Hit
TACCCTTACGATATTCCTGATTACGCATAAGAGCTCGCCAGCTCGCCTAA10.21321961620469082No Hit
GATGAGTCAGCGTCGAACATCCAACATTTATTGCATGATACGTGGCATTT10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCTGCGGCCGCTGAGGGCAGAGGAAG10.21321961620469082No Hit
GATGAGTCAGCGTCGAACATGCAACATTTAATGCATGACACGTGGCATTT10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCTTATCGGTGTGTTAACGGACGGCG10.21321961620469082No Hit
GATGAGTCAGCGTCGAACATTCAACATTTATTGCATGATACGTGGCATTT10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCGCGACGTTTTCGTTTGGGACTCTG10.21321961620469082No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGCGCAGGGATTGACTCG10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCTCGAAGCTTTCGTTGCGACTCTGT10.21321961620469082No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTTTGAAAATGGGATTGACTCC10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCTGGGATCGAAGATTTCGTTGGGGA10.21321961620469082No Hit
GAAGAGGGAATCGTCCCAGGCGGCGGTACTGCTCTTCTGCGCTCTTCCAC10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCGTCTGTGTCTCGAAGATTTCGTTG10.21321961620469082No Hit
CGGTTCGTGCGCTTCTGCGACGCGTTCGACATTCCGATCGTGACCTTCGT10.21321961620469082No Hit
CTGTAAAGATAAATGGGTCATCTAACGAGTATGGAGCTGGGATTGACTCG10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGGTCGGTGTGCTCGAATCTCTCGTTA10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCATAATTATTTAGTTGGGCGCCTCA10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCGTGGGCGCGGAGATTTTGGTGGGT10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCTCTCGGGCTCGAAGATTTCGTTGG10.21321961620469082No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGGCTCG10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCGGGTTTGGCTCTTTGGTTTGGTTG10.21321961620469082No Hit
GATGAGTCATCGTCTAACATGCAACATTTATTGCATTATACGTGGCATTT10.21321961620469082No Hit
CGGTTCGTGCGCTTCTGCGACGCGTTCGAGATCCCGATCGTGACGTTCGT10.21321961620469082No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATAGGTGGCATTT10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCATAGTGCAAATGCAGCCCGCCTAA10.21321961620469082No Hit
GATGCGTCCGCGTCTAACATGCACCCTTTATTGCCTGATACGTGGCATTT10.21321961620469082No Hit
CTGTAAAGATAAATGGGTCCTCTAAAGAGTATGGAGCTGGGATTGACTCG10.21321961620469082No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAACTGGGATTGACTCG10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCTGTGCGCGAAGATTTCGCTGGGAC10.21321961620469082No Hit
CTGTAAAGATAAATGGGTCATCTAACGAGAAGGGAGCTGGGGTGACTCCG10.21321961620469082No Hit
TACCCTTACGATGTTCCTGATTACGCTCTACGATTTAGTTTGGGACTCTT10.21321961620469082No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)