FastQCFastQC Report
Tue 7 Nov 2023
000000000-L65MN_l01_n01_MmdAPathoPool4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L65MN_l01_n01_MmdAPathoPool4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences211
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT7334.59715639810427No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG3918.48341232227488No Hit
GATGAGTCCGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT31.4218009478672986No Hit
AATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT20.9478672985781991No Hit
TACCCTTACGATGTTCCTGATTACGCGTGGGCTCGAAGATTTCGTTGGGG20.9478672985781991No Hit
GATGAGTCAGCGTCGAACATGCAACATCTATTGCATGATACGTGGCATTT20.9478672985781991No Hit
TACCCTTACGATGTTCCTGATTACGCTCGAAGATTTCGTTGGGGACTCTG20.9478672985781991No Hit
TACCCTTACGATGTTCCTGATTACGCTGGGCTCGAAGATTTCGTTGGGGA20.9478672985781991No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGAATGATACGTGGCATTT20.9478672985781991No Hit
ACGCCCAAGCAGATCTACAAGACGTTGACCGCAAGTGACTGTCTGATATA10.47393364928909953No Hit
CTGTAAAGATAAATGGGTCATCTAATCAGGATGAAGCAGCTGATGACTCG10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTGCGCTCGGAGATTTGGTTTGGTA10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTCGTAGATTTCTTAGAGGACTCTG10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTGTCTCAACTACTTCGGCGGGGAC10.47393364928909953No Hit
GATGCGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCCTGGGCCCGGAGGTTTTGGTGGGG10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCGTTCGTGGGCTCGAAGATTTCGTT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTTCGAATGTTTTTTTAGGAACTCG10.47393364928909953No Hit
GATGAGTCAGCGTCGCACATGCAACATTTATTGCATGATACGTGGCATTT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTTCTGGCCTCGAATATATCGTAGT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCGTCTTGGTATCGAATCTTTCGTTT10.47393364928909953No Hit
CGGTTCGTGCGCTTCTGCGACGCGTTCGAGATACCGATCGTGACGTTCGT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGACAACGCTGAACCCTTCTGTCTCTTATACAC10.47393364928909953No Hit
CTGTAAAGATAAATGGGTCATCTAACCTTTATGACACTGGTCAACCCTTC10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTTAAGTCTTTGCTATCGCTCGGGA10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGGTGCGCTCGAAGATTTCGTTGGGGA10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACTCTCGGGTCCGAAGATGCCGGTGGGG10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCATCGTATGTTTCCAGGGCGCCTCT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTGCGCTCGCAGATTTCGCTGGGGA10.47393364928909953No Hit
CTGTACAGATAAATGGGTCCTCTAAAGAGTATGTCGCTGGGATTGACTCG10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCGATGGTGCGAAGATTTCGTTGGGG10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGGTCCTCGAATATGTCGGGGACTACT10.47393364928909953No Hit
GATGCGTCCGCGTCTAACATGCACCCTTTATTGCATGATACGTGGCATTT10.47393364928909953No Hit
ACGCCCAAGCAGATCTACAACCGCCTGCAGAACGTCTATGCCGACCAGCA10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCGGCTCTCGGATCGTTCGTTTCGGT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTCCGTGTTCTCGAATCTGTCGTTT10.47393364928909953No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTC10.47393364928909953No Hit
GATGAGTCAGCGTCGAACATGCAAGATTTATTGCATGATACGTGGCATTT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCCGTGGGCTCTAATATTCCGTTGGA10.47393364928909953No Hit
CTTTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTGTGCCCTCAGATTTCGGTGGGGA10.47393364928909953No Hit
GATGAGTCAGCGTCGAACATGCAACAATTATTGCATGATACGTGGCATTT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTGAGCTCAGAGATTTCGTTGCGGA10.47393364928909953No Hit
CTGTAAAGATAAATGGGCCATCTAAAGAGTATGGAGCTGGGATTGACTCG10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATGATGCCCAAACTTTACTCTTCGGACTCTT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTCGGGCTCGAAGATGTCGTTGGGG10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCCTCTGTTTCTAGTAGTTCGTCTTG10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTCTAGGATTTAGTTTGGGACTCTT10.47393364928909953No Hit
ACCCCTTAGCAGTTTCATAATTGCTTTCGGCATCTCTATTTCGACCAGCG10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTAAGCTCGAAGATTTCGTTGGGGACTCTG10.47393364928909953No Hit
ACACCAAAGCAGATTTACGAGTCGTGGTAAATGTAATCTTGCTGTGGTCC10.47393364928909953No Hit
GATGAGTCAGCGTCTAACATGCACCATTTATTGCATGATACGTGGCATTT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTTCTGTTGCTCGAATCTTTAGTTT10.47393364928909953No Hit
GATGAGTCAGCGTCGAACATGCAACATTTCTTGCATGATACGTGGCCTTT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATCTTGGTCTCGAATCTTTCTTTGGTGACTC10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTCGATGAGTTCGTTGGGGACTCTT10.47393364928909953No Hit
GATGAGTCAGCGTCGAACATGCAACATTTAATGCATGATACGTGGCATTT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCCGTGCGCTCAGATTTTGCTTTGGA10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCGTCTCGTTGCTCGAAGATTTCGTT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACCAGGTGACAAAGCTGAAATCGTCTGG10.47393364928909953No Hit
GATGCGTCCGCGTCTAACATGCACCCTTTATTTCATGAAACGTGTCATTT10.47393364928909953No Hit
AAGGAAAGAAAAAAGGGAAAGCAAAAGAGAAGGGAGCTGGGATTGACTCG10.47393364928909953No Hit
TACCCTTACGATGTTCCTGACAACGCAGAACCCTTCTGTCTCCCATCTAC10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTTAGCACTTAGATTTCGCTGGGGA10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTTTGTGATTGGGGTTTTGGCTCTG10.47393364928909953No Hit
ACACCCAAGCCGATTTACACCGATCCTGCCCACCTGTTCTTCGCCCGCTT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCGTCTGTCTCGAAGATTTCGTGGTG10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCATAAGATTTTGCCAGCCCTCATAA10.47393364928909953No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGGATGGAGATGGGATAGACTCG10.47393364928909953No Hit
GATGAGTCATCGTCGAACATGCAACATCTATTGCATGATACGTGGCATTT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCGTGAGGTTTTCGATTGGGTCGCTG10.47393364928909953No Hit
GATCAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT10.47393364928909953No Hit
CGGTTCGTGCGCTTCTGCGATGCGTTCGATATTCCGATCGTGACGTTCGT10.47393364928909953No Hit
ACACCCTAGCAGCTTTACGAGTCGTGTTAAGTTTCATCTTGCTGGCCTAC10.47393364928909953No Hit
CTGTAAAGGTAAATGGGTCATCTAATGATTATGGCGCTGTGATTTCCTCG10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCATCTGTGGTTCGCAGATTTCCTTG10.47393364928909953No Hit
GATGGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCATAGGCTCGAAGATGTCGGTGGGA10.47393364928909953No Hit
CTGTACAGATAAATGGGCCATCTAAAGAGTATGGAGCTGGGATTGACTCG10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTTCCGTCGACTCTATGATTTGGTT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTCTACGATTTCGTTTGGGACTCTT10.47393364928909953No Hit
GTTTAGTCATCGTCGAACCTGCAACATTTATTGCATGATACGTTGCATTT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTGAGCACTTAGATTTCGCTGGGGA10.47393364928909953No Hit
GATGAGTCGGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT10.47393364928909953No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGGTACGTGGCATTT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTCTAAGATTTCGTTTGGGACTCTT10.47393364928909953No Hit
GATGAGTCAGCGTCGAATAGCCGTTCACTATGCCAAGCGTCATCAGGGCC10.47393364928909953No Hit
CTGTAAAGATAAATGGGTCCTCTAAAGAGTATGGAGCTGGGATTGACTCG10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTCGAAGATTTCGTTGGTGACTCTG10.47393364928909953No Hit
GATGAGTCAGCGTCGAACATGCACCATTTATTGCATGATACGTGGCATTT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTTAATCGGCCGCCAGACCAAAATC10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCGCCTCTGGTTTCGAAGGTTTCTTT10.47393364928909953No Hit
TACCCTTACGATGTTCCTGATTACGCTCTACGATTTAGTTTGGGACTCTT10.47393364928909953No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)