FastQCFastQC Report
Tue 7 Nov 2023
000000000-L65MN_l01_n01_JS13.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L65MN_l01_n01_JS13.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98
Sequences flagged as poor quality0
Sequence length301
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT2929.591836734693878No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG1212.244897959183673No Hit
TACCCTTACGATGTTCCTGATTACGCTCGAAGATTTCGTTGGGGACTCTG22.0408163265306123No Hit
ACACCCCACGCGGATCTCGGAGCCCCCGAGCCCGAAGTATATCTCGTATT11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATTACGCTCTTCGATTTAGTTTGGGACTCTT11.0204081632653061No Hit
CTGTAAAGGTAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG11.0204081632653061No Hit
TACCCTTACGATGTTCCTGACATAGCTGCTCCCGAAGATTTCGTGTACAC11.0204081632653061No Hit
CGGTTCGTGCGCTTCTGCGACGCGTTCGAGATTCCGATCGTGACGTTCGT11.0204081632653061No Hit
GAAGCGTCCGCGTCTAACATGAACCCTCTATTTCCTGATACGTGGCATTT11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATTACGCTTGGCTCGAAGGATTTCGTTGGGT11.0204081632653061No Hit
GATGAGTCAGCGTCTAACATGAACCCTTTATTGCATGATACGTGGCATTT11.0204081632653061No Hit
TACCCTTACGCTGTTCCTGATAGCGTCTAGCCAGACGATTCGTGGTAAAT11.0204081632653061No Hit
TACCCTTACGCTGTTCCTGATATAGTCTAGCCACACGATTCGTGGTAAAT11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATTACGCTCGGAGCTTACATTGCGTTCGGTG11.0204081632653061No Hit
CTGTAAAGATAAAAGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG11.0204081632653061No Hit
CTGTAAAGGTAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGCCTCG11.0204081632653061No Hit
CTGTCAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG11.0204081632653061No Hit
GAAGAGGGAATCGTCCCCGGTGGCGGCACCGCGCTGCTGTACGCGACCAA11.0204081632653061No Hit
CTGTAATGGTAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATTACAACGTTAGCTCGATGAGTTCTTTGGT11.0204081632653061No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCCTTT11.0204081632653061No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGTCATTT11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATTACGCCGTGGGCTCTAATATTTCTTTGGT11.0204081632653061No Hit
GATGAGTCAGCGTCGAGCATGCAACATTTATTGCATGATACGTGGCATGT11.0204081632653061No Hit
GATGCGTCCGCGTCGAACATGCACCATTTATTGCATGATACGTGGCATTT11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATTACGCCGGGCTCGAGAAGATTTTTTTGGT11.0204081632653061No Hit
GAGGAGGGAATCGTCCCCGGCGGCGGTACGGCGCTGCTGTACGCCACCAA11.0204081632653061No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGAATGGAGCTGGGATTGACTCG11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATTACGCATCATGCAGTTGCATCCCTCGTTA11.0204081632653061No Hit
GATGAGTCAGCGTCGAATAGCCGTTCACTATGTTGCGGTTACTCACTGTC11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATTACGCTGCGCTCGCACATTGAGTTCGGGG11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATTACGCCGTGGGCTCGAAGATTCCTTTGGG11.0204081632653061No Hit
GATGAGTCAGCGTCGAACATGCAACCTTTATTGCATGATACGTGGCATTT11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATTACGCGGTGGGCTCGAAGATTTCGTTGGG11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATAACGTCCGGACATTCGATTGGTGATAAAG11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATTACGCTCTAAGATTTCGTTTGGGACTCTG11.0204081632653061No Hit
GATGAGTCAGCGTCGAACATGCACCCTTTATTGCATGATACGTGGCATTT11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATTACGCTGCGACCTCTCTTTGCAGAGGAAG11.0204081632653061No Hit
CTGTAAAGATAAATGGGTCATCTAAAGCGTATGGAGCTGGGATTGACTCG11.0204081632653061No Hit
GATGAGTCAGCGTCTAATAGCCGTTCACTATGCCAAGCGTCAGCAGGGCC11.0204081632653061No Hit
CTGTAAAGATGAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATTACGCTGAGCTCGCAGATTTCGCGGGGGA11.0204081632653061No Hit
GAGGAGGGCATCGTCCCCGGCGGCGGCACCGCCCTCCTCCGCGCCCGCGA11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATTACGCTTCTGATTCTCGAAGCTTTCGATT11.0204081632653061No Hit
GATGAGTCAGCGTCGACCATGCAACATTTATTGCATGATACGTGGCATTT11.0204081632653061No Hit
CTGTAAAGGTAAATGGGCCATCTAAAGAGTATGGAGCTGGGATTGACTCG11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATTACGCGTCTTGGGCTCGAAGATTTCGTTG11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATTACGCTTGTCTGGATCGAATGTGTCGTTT11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATTACGCGTCCTGGGCTCGAAGATTTCGTTG11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATTACGCTCAAGATTTTCCCAGCCCTCGTTG11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATTACGCTTTGGCTCGAAGATTTCGTTGGGG11.0204081632653061No Hit
GATGAGTCATCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATTACGGGCTGATCGAAGTTGTCGTGGGGGA11.0204081632653061No Hit
TACCCTTACGCTGTTCCTGATTACGCTCTACGATTTAGTTTGGGACTCTT11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATAACGTCTAGGCATCCGATTCGCGTTAAAG11.0204081632653061No Hit
GATGAGTCGGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT11.0204081632653061No Hit
CTGTAAAGATACATGGGTCATCTAAAGAGTATGGAGCTGGGATTGCCCCG11.0204081632653061No Hit
TACCCTTACGATGTTCCTGATTACGCTGTGCTCTCAGAGTTCGTTGGGGA11.0204081632653061No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)