FastQCFastQC Report
Thu 25 Jan 2024
000000000-L4L4P_l01_n02_undetermined.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L4L4P_l01_n02_undetermined.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences535358
Sequences flagged as poor quality0
Sequence length51
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTTGACTGGAGTTCAGACGTG12490.23330182793569912Illumina Single End PCR Primer 1 (97% over 35bp)
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGT5530.10329536497072987Illumina Single End PCR Primer 1 (100% over 51bp)
AAGGGTTCAGCTTTGTCAACAATGGAGGCAACAACTTTGCTGTGAACATCT5390.1006802924398253No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)