FastQCFastQC Report
Mon 17 Apr 2023
000000000-KWF5G_l01_n02_ELP2H5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-KWF5G_l01_n02_ELP2H5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1158
Sequences flagged as poor quality0
Sequence length301
%GC53

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCACCTT54747.236614853195164No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT28724.784110535405873No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCTCT211.8134715025906734No Hit
AAAGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCACCTT171.468048359240069No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGTCAGTCACCTT141.2089810017271159No Hit
AAGGCCACGTCATCCCCTCCTTCCTCCGGTTTGTCACCGGCAGTCACCTT131.1226252158894647No Hit
AAGGCCACGTCATCCCCACCTTCCTCTCGGCTTATCACCGGCAGTCCCCT110.9499136442141624No Hit
AAGGCCACGTCATCCCCTCCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT80.690846286701209No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGAAGTCACCTT60.5181347150259068No Hit
AAGGCCACGTCATCCCACCTTCCTCCGGTTTGTCACCGGCAGTCACCTTA50.4317789291882556No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGAAGTCTCCTT40.3454231433506045No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCACCGT40.3454231433506045No Hit
AAGGCCACGTCATCACCACCTTCCTCCGGTTTGTCACCGGCAGTCACCTT30.2590673575129534No Hit
AAAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCACCT30.2590673575129534No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCCCCTT30.2590673575129534No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGTCATTCTCCTT30.2590673575129534No Hit
AAGGCCACGTCAGCCCCACCGGCCGCCGGTTGGGCACCGGCAGTCACCGG30.2590673575129534No Hit
AAGGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCT30.2590673575129534No Hit
AAGGCCACGTCATCCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCT20.17271157167530224No Hit
AAGGCAACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT20.17271157167530224No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCACCAT20.17271157167530224No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTTTCACCCTCAGTCACCTT20.17271157167530224No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCGT20.17271157167530224No Hit
AAGGCCACGTCATCCTCACCTTCCTCCGGTTTGTCACCGGCAGTCACCTT20.17271157167530224No Hit
AAGGCCACGTCATCACCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT20.17271157167530224No Hit
AAGGCCACGGCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCACCTT20.17271157167530224No Hit
AAGGCCACGTCATCCCCACCTTCCTACGGTTTGTCACCGGCAGTCACCTT20.17271157167530224No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCAACTT20.17271157167530224No Hit
AAGGCCACGTCATACCCACCTTCCTCCGGTTTGTCACCGGCAGTCACCTT20.17271157167530224No Hit
AAAGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT20.17271157167530224No Hit
AAGGCCTCGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCACCTT20.17271157167530224No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTG20.17271157167530224No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)