FastQCFastQC Report
Mon 17 Apr 2023
000000000-KWF5G_l01_n02_ELP2C1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-KWF5G_l01_n02_ELP2C1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116
Sequences flagged as poor quality0
Sequence length301
%GC53

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCACCTT6757.758620689655174No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT2824.137931034482758No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGTCAGTCACCTT43.4482758620689653No Hit
AAAGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCACCTT32.586206896551724No Hit
AAGGCCACGTCATCACCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT21.7241379310344827No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCATTCACCTT10.8620689655172413No Hit
AAGGCCACGTCATCCTCACCTTCCTCCGGTTTTCCACCGTCAGTCTCCTT10.8620689655172413No Hit
AAGGCCACGTCATCACCACCTTCCTCCGGTTTGCCACCGTCAGTCACCTT10.8620689655172413No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACAGGCAGTCACCTT10.8620689655172413No Hit
AAGGCCACGTCATCCCCACCTTCCTACGGTTTGTCACAGGCAGTCTCCTT10.8620689655172413No Hit
AAGGCCACGGCATCACCACCCTCCCCCGGTTAGTCACCGTCATTCACCTA10.8620689655172413No Hit
AAGGTCACGTCATCCCCACCTTCATCCGGTTAGTCATCGTCAGTCGCCTT10.8620689655172413No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACAGGCAGTCGCCTT10.8620689655172413No Hit
AAGGCAACGTCATCCTCACCATCATCCGGTTTGTCATCGTCAGTCACCTT10.8620689655172413No Hit
AAGGCCACGTCACCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT10.8620689655172413No Hit
AAGGCCACGTCATCCTCACCTTCCTCCGGTTTGTCACCGGCATTCTCCTT10.8620689655172413No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTAGTCACAGGCGGTCACCTT10.8620689655172413No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)