FastQCFastQC Report
Mon 17 Apr 2023
000000000-KWF5G_l01_n02_ELP2A3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-KWF5G_l01_n02_ELP2A3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1633
Sequences flagged as poor quality0
Sequence length301
%GC52

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT123375.50520514390692No Hit
AAAGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT432.6331904470300063No Hit
AAGGCCACGTCATCCCCTCCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT271.653398652786283No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGTCAGTCTCCTT201.224739742804654No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGAAGTCTCCTT160.9797917942437232No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACAGGCAGTCTCCTT100.612369871402327No Hit
AAGGCCACGTCATCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTTA100.612369871402327No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCACCTT70.4286589099816289No Hit
AAGGCCACGTCATCACCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT70.4286589099816289No Hit
AAGGCCACGTCATCCTCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT70.4286589099816289No Hit
AAGGCCACGTCCTCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT60.3674219228413962No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCATTCTCCTT60.3674219228413962No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGTCATTCTCCTT50.3061849357011635No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCATCGGCAGTCTCCTT40.2449479485609308No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTTTCACCGGCAGTCTCCTT40.2449479485609308No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCCGCAGTCTCCTT40.2449479485609308No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCTCT40.2449479485609308No Hit
AAGGCCACGTCATCCCCACCTTCCTACGGTTTGTCACCGGCAGTCTCCTT30.1837109614206981No Hit
AAGGCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTTA30.1837109614206981No Hit
AAGGCCACGTCATCCCCACCTTCCTCCAGTTTGTCACCGGCAGTCTCCTT30.1837109614206981No Hit
AAGGCCCGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTTA30.1837109614206981No Hit
AAGGCCACGTCATCCCCACCTTCATCCGGTTTGTCACCGGCAGTCTCCTT30.1837109614206981No Hit
AAGGCCACGTCTCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTTA20.1224739742804654No Hit
AAGGCCACGTCATCCCCACCTTCCTCAGGTTTGTCACCGGCAGTCTCCTT20.1224739742804654No Hit
AAGGCAACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT20.1224739742804654No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGTAAGTCTCCTT20.1224739742804654No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTATCCTT20.1224739742804654No Hit
AAGGCCACTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTTA20.1224739742804654No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTACTT20.1224739742804654No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTAACCGGCAGTCTCCTT20.1224739742804654No Hit
AAGGCCACGTCATCCTCACCTTCCTCCGGTTTGTCACCGTCAGTCTCCTT20.1224739742804654No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGTAATTCTCCTT20.1224739742804654No Hit
AAGGCCACGTCATCCCCACCTTCCTTCGGTTTGTCACCGGCAGTCTCCTT20.1224739742804654No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCAT20.1224739742804654No Hit
AAGGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCT20.1224739742804654No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGTAGTCTCCTT20.1224739742804654No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)