FastQCFastQC Report
Mon 17 Apr 2023
000000000-KWF5G_l01_n02_ELP1H6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-KWF5G_l01_n02_ELP1H6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1835
Sequences flagged as poor quality0
Sequence length301
%GC52

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT138575.47683923705722No Hit
AAAGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT452.452316076294278No Hit
AAGGCCACGTCATCCCCTCCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT311.6893732970027249No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGTCAGTCTCCTT271.4713896457765667No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGAAGTCTCCTT160.8719346049046321No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACAGGCAGTCTCCTT90.4904632152588556No Hit
AAGGCCACGTCATCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTTA90.4904632152588556No Hit
AAGGCCACGTCATCCCCACCTTCATCCGGTTTGTCACCGGCAGTCTCCTT70.38147138964577654No Hit
AAGGCCACGTCATCACCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT60.32697547683923706No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTTTCACCGGCAGTCTCCTT60.32697547683923706No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCATTCTCCTT60.32697547683923706No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTATCCTT50.2724795640326975No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTACTT50.2724795640326975No Hit
AATGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT50.2724795640326975No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCATCGGCAGTCTCCTT40.21798365122615804No Hit
AAGGCCCCGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT40.21798365122615804No Hit
AAGGCCACGTCATCCTCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT40.21798365122615804No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCCGCAGTCTCCTT40.21798365122615804No Hit
AAGGCCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCT40.21798365122615804No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTAACCGGCAGTCTCCTT40.21798365122615804No Hit
AAGGCCACGTCATCCCCACCTTCCTACGGTTTGTCACCGGCAGTCTCCTT30.16348773841961853No Hit
AAGGCCACGTCTCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTTA30.16348773841961853No Hit
AAGGCAACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT30.16348773841961853No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCACCTT30.16348773841961853No Hit
AAGGCCACGTCATCCCCGCCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT30.16348773841961853No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCCCCGGCAGTCTCCTT30.16348773841961853No Hit
AAGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTTA30.16348773841961853No Hit
AAGGCCACGTCATCCCCACCTTACTCCGGTTTGTCACCGGCAGTCTCCTT30.16348773841961853No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGTAAGTCTCCTT20.10899182561307902No Hit
AAGGCCACGTCCTCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT20.10899182561307902No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTTTCACCGGCATTCTCCTT20.10899182561307902No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGAATTCTCCTT20.10899182561307902No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTTTCACCGTCATTCTCCTT20.10899182561307902No Hit
AAGACCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT20.10899182561307902No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTGTAGTCCTGTCTCTTATAC20.10899182561307902No Hit
AAAGCCACGTCATCCTCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT20.10899182561307902No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCAT20.10899182561307902No Hit
AAGGCCACCTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT20.10899182561307902No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCGCCTT20.10899182561307902No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGTAGTCTCCTT20.10899182561307902No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)