FastQCFastQC Report
Mon 17 Apr 2023
000000000-KWF5G_l01_n02_ELP1H5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-KWF5G_l01_n02_ELP1H5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1037
Sequences flagged as poor quality0
Sequence length301
%GC55

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT71869.23818707810993No Hit
AAGGCCACGTCATCCCCTCCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT212.0250723240115716No Hit
AAAGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT191.832208293153327No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGAAGTCTCCTT151.446480231436837No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGTCAGTCTCCTT100.9643201542912248No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCACCTT100.9643201542912248No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCATTCTCCTT80.7714561234329798No Hit
AAGGCCACGTCATCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTTA60.5785920925747349No Hit
AAGGCCACGTCATCCCCACCTTCCTACGGTTTGTCACCGGCAGTCTCCTT50.4821600771456124No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGTAAGTCTCCTT50.4821600771456124No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCCGCAGTCTCCTT40.3857280617164899No Hit
AAGGCCACGTCATCTCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT40.3857280617164899No Hit
AAGGCCACTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTTA40.3857280617164899No Hit
AAGGCCCCGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT40.3857280617164899No Hit
AAGGCCACGTCATCCTCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT30.28929604628736744No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTAGTCACCGGCAGTCTCCTT30.28929604628736744No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGTCATTCTCCTT30.28929604628736744No Hit
AAGGCCCGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTTA30.28929604628736744No Hit
AAGGCCACGTCATCCCCCCTTCCTCCGGTTTGTCACCGGCAGTCTCCTTA30.28929604628736744No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCCCCGGCAGTCTCCTT30.28929604628736744No Hit
AAGGCCACGTCATCACCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT30.28929604628736744No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTTTCACCGGCAGTCTCCTT30.28929604628736744No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACAGGCAGTCTCCTT30.28929604628736744No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCCTCAGTCTCCTT20.19286403085824494No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGACTCCTT20.19286403085824494No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCATTCTCTCT20.19286403085824494No Hit
AAGGCCACGTCCTCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT20.19286403085824494No Hit
AAGGCCACGTCATCCCCACCGGCCGCCGGTTTGTCACCGGCAGTCTCCGG20.19286403085824494No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCGT20.19286403085824494No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTATCCTT20.19286403085824494No Hit
AAGGCCACGTATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTTA20.19286403085824494No Hit
AAGGCCACGTCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTTAGA20.19286403085824494No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCTCT20.19286403085824494No Hit
AAGGCCACGTCATCCCCACCTTACTCCGGTTTGTCACCGGCAGTCTCCTT20.19286403085824494No Hit
AAGGCCCCGTCATCCCCACCTTCCTCCGGTTTGTCACCGGAAGTCTCCTT20.19286403085824494No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)