FastQCFastQC Report
Thu 18 Aug 2022
000000000-KG26R_l01_n02_nHRB16EB.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-KG26R_l01_n02_nHRB16EB.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22370
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGACTGGAGTTCAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGGAT3131.399195350916406Illumina Single End PCR Primer 1 (97% over 37bp)
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGGATCAAGTGTAGATCT1720.7688869021010282Illumina Single End PCR Primer 1 (97% over 38bp)
GTGACTGGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGGATCAAGT1300.581135449262405Illumina Single End PCR Primer 1 (97% over 38bp)
CCAGTCACAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGGATCAAGT280.12516763522574878Illumina Single End PCR Primer 1 (97% over 38bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)