FastQCFastQC Report
Mon 2 May 2022
000000000-K6NVC_l01_n02_FCC_Seq_Neg_rep1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-K6NVC_l01_n02_FCC_Seq_Neg_rep1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCATATCTCTTGCTCCACTTCAAGCAATAGTTGTAAGGCTTGCATAAA12.7027027027027026No Hit
ATCTAGGGGGATCTGCCCAGCAGAGCCGTATCCTTGGCTCTGCTCTGGAA12.7027027027027026No Hit
CTGGAAGGGAAGGTCATGGTGAGATTTCGCCCACTATTGCTCATTCATCT12.7027027027027026No Hit
GCACATACTAGTCCAAGAGCCACTTCTGTGGTCACGCTTCGGAACCGGCT12.7027027027027026No Hit
GTCAATTATATTCCGTCTGCCGAGAATAACAGACCTGAGAGATCTAATGT12.7027027027027026No Hit
TCCTCATACCCTGCACCATTTGCCTAGCCTGACTTGCGACTTCCATGGCT12.7027027027027026No Hit
GTATTGGGCGTCTTGAACAGGGAAAAAACCGCTCTTTTGAGTCAGCCATC12.7027027027027026No Hit
TTCTAGACGCAGTCTCTATTGAATGCCTCTACAGTGTAAACCCTTGATGT12.7027027027027026No Hit
CCATTGGGACTCATCCTAGTTCCAGTACTGGTCTCAGAGATGATCTTCTT12.7027027027027026No Hit
CAAGATAGTCTTTTCCTCTAGCTCTATGTTGACAAAGTAACCATAGTCAG12.7027027027027026No Hit
TATGAGACCCATGCAACTGGCAAGCGCACCAGTTGAGTAACTGAGTGCAA12.7027027027027026No Hit
AAACACATTAGAGATTACACTTTAAGCAAAGGGTCCAAGGGTCAAACATT12.7027027027027026No Hit
CCATCATATTGAAAGCAAACTTTAGTGTGATTTTTAATCGACTTGAAGCT12.7027027027027026No Hit
GTAGCAGAATACAAGAATTTGTCAAAACCGCAATGTCAAATTACAGGGAT12.7027027027027026No Hit
TGATAGAAGACTCAGCCTCGATCATGCTCTCAATCTGTTGAAGAGATTGA12.7027027027027026No Hit
CGGAATAGGAGGGTGGGTGATGTAATCAGCACACGACAAGACTGGCCTTT12.7027027027027026No Hit
GCAACTACACATTCATGGATTCCCAAGAGAAATCGCTCCATTCTCAACAC12.7027027027027026No Hit
AGGCATTAATGACCGGAACTTCTGGAGAGGCGATAATGGACGAAGAACAA12.7027027027027026No Hit
CCCTGAAAGTCTCATAACCATACCGCGACTCTTTCTTGATTGCTCGCCCC12.7027027027027026No Hit
GAGGACAATTGGGACTCATCCTAGTTCCAGTGCAGGTCTAAAAGATGATC12.7027027027027026No Hit
ATCCAGCAGAGTAGTCCCCTTATTATCCCTGCAAGGAAAAAGATCGGCAG12.7027027027027026No Hit
GGAGAGAGCCTGTTGTAGACACGTGAGGAGTTACTTATGGAAGCCTCCTT12.7027027027027026No Hit
GATGTGCACTGAACTCAAACTCAGCGACCAAGAAGGAAGGTTGATCCAGA12.7027027027027026No Hit
CTGATTTGTCCTGCAGATGCTCTCTGTTGATTGGTGTTTCCTCCACTCCT12.7027027027027026No Hit
CCATCCCCAAATCACGGTGGAACTATCATTCTTATCTTGGGAGGAATACA12.7027027027027026No Hit
GTCCTCATAGCCTGCACCCTTTGCCTAGCCTGACTTGCGACTTCCATGGC12.7027027027027026No Hit
TCGGAACAGTCAGGTTTTCTCTCTTATTAGATCAAATTCGTATTCAGCAC12.7027027027027026No Hit
CTGATACTACTTAGAGCGTTTACAGATGAAGGAGCAATAGTGGGCGAAAT12.7027027027027026No Hit
ACTTGAATCTCTGCATTTGCACTCCCATCCGTTTCTGGTAAGCCTGCAAA12.7027027027027026No Hit
GTTTAACAGACAATGAGCCAGGAAGGTTAATAGATTTCCTCAAGGACGTA12.7027027027027026No Hit
CCATGGTCAGGCCAAGAGCATGGAATATGATGCCGTTGCAACTACACATT12.7027027027027026No Hit
GAATTAGTGGCTCCGCGGTTTTCTCTTTGGGCCCCCTTGTGGCGCATTCC12.7027027027027026No Hit
GGCTTGGACAAGAGCGTCACAGTGAAGATGAGAAGTAAGAGGTTTTGGGA12.7027027027027026No Hit
GATACTCTGTTCCCGCCAATTCATCTCTCCGTCCCCTTGGGCAGGCCGCT12.7027027027027026No Hit
AGCAGGTACTGATCCAAAATGGAATACTTTGTGCGACAGTGCTTCAATCC12.7027027027027026No Hit
GAGCGTCCCATTCTGGCTTCAACTATGGCACTGGTGGTGGTTTGGGCCCC12.7027027027027026No Hit
ATCTTATTATTGATCATATTGAGTCTAGTTTCAACCTCACTGAATTCATG12.7027027027027026No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)