FastQCFastQC Report
Thu 24 Mar 2022
000000000-K6NDM_l01_n01_NlaIII_639.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-K6NDM_l01_n01_NlaIII_639.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13696
Sequences flagged as poor quality0
Sequence length301
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGAGTGTCGATGAATCACAATCTCCGAGCCCACGAGACTAGGCATGATC200.14602803738317757No Hit
CCGAGTGTCGATGAATCATTATCTCCGAGCCCACGAGACTAGGCATGATC170.12412383177570092No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)