FastQCFastQC Report
Thu 24 Mar 2022
000000000-K6NDM_l01_n01_NlaIII_500.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-K6NDM_l01_n01_NlaIII_500.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16768
Sequences flagged as poor quality0
Sequence length301
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGAGTGTCGATGAATCAATGTCTCCGAGCCCACGAGACGGACTCCTATC370.22065839694656492No Hit
CCGAGTGTCGATGAATCAAGGTCTCCGAGCCCACGAGACGGACTCCTATC360.21469465648854963No Hit
CCGAGTGTCGATGAATCAATGGCTCCGAGCCCACGAGACGGACTCCTATC300.17891221374045801No Hit
CCGAGTGTCGATGAATCAAGTGCTCCGAGCCCACGAGACGGACTCCTATC290.17294847328244276No Hit
CCGAGTGTCGATGAATCACAATCTCCGAGCCCACGAGACGGACTCCTATC280.16698473282442747No Hit
CCGAGTGTCGATGAATCAGTATCTCCGAGCCCACGAGACGGACTCCTATC260.15505725190839695No Hit
CCGAGTGTCGATGAATCAAGGGCTCCGAGCCCACGAGACGGACTCCTATC230.13716603053435114No Hit
CCGAGTGTCGATGAATCAAAGGCTCCGAGCCCACGAGACGGACTCCTATC200.11927480916030535No Hit
CCGAGTGTCGATGAATCAATTTCTCCGAGCCCACGAGACGGACTCCTATC190.11331106870229007No Hit
CCGAGTGTCGATGAATCATAGTCTCCGAGCCCACGAGACGGACTCCTATC180.10734732824427481No Hit
CCGAGTGTCGATGAATCATTATCTCCGAGCCCACGAGACGGACTCCTATC180.10734732824427481No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)