FastQCFastQC Report
Thu 24 Mar 2022
000000000-K6NDM_l01_n01_DpnNla_1223.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-K6NDM_l01_n01_DpnNla_1223.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41731
Sequences flagged as poor quality0
Sequence length301
%GC42

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGAGTGTCGATGAATCAATGGCTCCGAGCCCACGAGACGTAGAGGAATC1000.23963001126261052No Hit
CCGAGTGTCGATGAATCAAGGGCTCCGAGCCCACGAGACGTAGAGGAATC970.23244111092473224No Hit
CCGAGTGTCGATGAATCAAGGTCTCCGAGCCCACGAGACGTAGAGGAATC880.21087440991109727No Hit
CCGAGTGTCGATGAATCAAGTGCTCCGAGCCCACGAGACGTAGAGGAATC800.19170400901008844No Hit
CCGAGTGTCGATGAATCAAAGGCTCCGAGCCCACGAGACGTAGAGGAATC540.1294002060818097No Hit
CCGAGTGTCGATGAATCAATGTCTCCGAGCCCACGAGACGTAGAGGAATC490.11741870551867917No Hit
CCGAGTGTCGATGAATCAAGGCCTCCGAGCCCACGAGACGTAGAGGAATC460.11022980518080085No Hit
CCGAGTGTCGATGAATCAGTGGCTCCGAGCCCACGAGACGTAGAGGAATC440.10543720495554863No Hit
CCGAGTGTCGATGAATCAGTGTCTCCGAGCCCACGAGACGTAGAGGAATC430.10304090484292251No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)