FastQCFastQC Report
Thu 23 Dec 2021
000000000-K4LKV_l01_n02_SynCon_Control08_rep1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-K4LKV_l01_n02_SynCon_Control08_rep1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40
Sequences flagged as poor quality0
Sequence length76
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATGGAATGGAATGGAATGGAACCAACTCGATTGTGATGGAATGGAATG12.5No Hit
AAAAAGGACCTTGCCATTTTAGACGAAAAACAGATTTGCTTAGCCAGTGA12.5No Hit
CATCTAGACCCTCATTGGAGGATCTTCTAACTAAAGTAGAGACATTGGAT12.5No Hit
CTTCCGCGGCCGCGCGCGCTTTTCGGATAGTCTCTTATACACATCTGACG12.5No Hit
GTCCATGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACATGCGG12.5No Hit
ATCTTGAAGTGAATATTTGGAGGGCTTTGAGACCTGCTTTGGAGAAGGAG12.5No Hit
CTGTCACCTCAGCTGATAGTTCAGTTGTCCCTGTCACTTCTGCTGATAGT12.5No Hit
CAGCTATGGTGCAGTGAAAATAGCACTTGAAATAAATGTTGAAGATCTGG12.5No Hit
ATTCTATTCCATTCCATTCCATTCCATTCCATTCCATTCCAATCCATTCC12.5No Hit
ATTTCCAAGCCAAGGTCATGCCTTATGCTTGGAAATTGATTTTAAAGGTG12.5No Hit
ATACCACAATATTGCTTCTGACAGCTAGAAACTCATATGGGGACTATTTA12.5No Hit
ACATAGTTTGCAGTTTCCTACATTTAGTGGCTTAAAACACCACAAATCTA12.5No Hit
GTGTACTGATTCTAGCTGAGACCTTTACTAAACAGGCATCTTCCTGTCTC12.5No Hit
GACTAGTGCAGAATCCTGAAGTGATTTGCTTCGATAAGTAGATAAGTGTG12.5No Hit
ACATTACATTGCAATCGAGTTGATTCCATTCCATTCCGTTCCATTCCATT12.5No Hit
GGGAGTATCCTTCACCTAATGATATGGAAACCCTTTGGTTCTCTGACTGT12.5No Hit
TGCTGGGGGTATCGATCGGGGTCCGCACAGAGGGGCCACCAAGAAAAACC12.5No Hit
ACATGACCCCAAGCACGGAGATGTCGCTGAGAGGGATAAGAGTCAGCAAA12.5No Hit
ATCGTAGTTACAGAAATGGCAGTAGCTAAAACAGTTGAACTTAACACTTC12.5No Hit
GCAATAAATACCTAACTCTTCAATGCCCATGCACCAAAGAACACCTACTA12.5No Hit
GATGACAATAACGTGAATCTCGTTAATGTTGAAGGTCATGAACTGTCTCA12.5No Hit
ATCTCAGGCCTACTAGCCCTACACCAATTCCTAAGTCAGTCAAAAAGAAA12.5No Hit
GAACAGGAGGTCGGTATATTGGAGTGTTGCACTTAACCCAAGGGACGTGC12.5No Hit
GCTGTGAACCATGTTTTGGCTTGTCCTATTGTTTCTTAATACCTTTAACA12.5No Hit
ATTTCCTGAGACTTGTTTTTTTAATTCCTGACAATCTGTCTCTTATACAC12.5No Hit
CTGACTGCAGAGCGTAGCTGACGTCATGGCTGATATCAGCCCTGTCTCTT12.5No Hit
GTGTCATCTCCTCTCTTTATAAGGACACCTGTCATTGGATTTAGAACTCA12.5No Hit
ATGTAAAAGTAACCGCCTTTAGCCAGTTGCTCTGCTACATTCTCATCCAA12.5No Hit
GTCATCAAGGGCATAGATGAGCTGGGCAAGCTTGACGACGTCGATGCGAT12.5No Hit
CACGCGATCTCTGCGGAAGTGTCGTTACAGCCATCGGTGGTGATCCGCCA12.5No Hit
TTACAATGCCGAACTGTTGGTTCTATTGGAAAATGAAAGAACTTTGGACT12.5No Hit
CTCCCCTAAACATGTGGACACCACCCATGAGTTCTTCCGCAAGCATGGTT12.5No Hit
CAGCTGGAAGAAGCAATGAATACGCAATTAGAACTTTCAGAACCTGTCTC12.5No Hit
GTTTTCCCGTGTTTTGGATGCCTACGGCCGTGAGGATGAGCCCCTGCCAC12.5No Hit
GCCTTGTTGGCTTTGACTAATCTGCTGATAAAATTTTAAATTTTCCCATG12.5No Hit
TTTTTGGTTAGTGTTTGGGGTTAGTGTATTGGATTCTTCAGTTTGTTGCT12.5No Hit
GTTGATGGACAACGTGTCGAAACTAATATCCGAAAAAGTGTCGATCCGAG12.5No Hit
GAAAAAGGCTGGGAAACGATTAAAGAAAAAGATTACCATTTCAAATCAGA12.5No Hit
CATTAAACAAAGCATCCATTATAGCTTGGAAAAGAGCATCTCTTCTAATT12.5No Hit
ATACAAACGTCTTAACCAATTTGATGCGGGTGTCTTGACTGGTAAACCTC12.5No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)